RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
MSH5-214ENST00000468602 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
MSH5-214ENST00000468602 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
MSH5-214ENST00000468602 TAS2R14Q9NYV8 317 aa11.84□□□□□ -0.51
MSH5-214ENST00000468602 DNMT3BQ9UBC3 853 aaKnown RBP11.84□□□□□ -0.51
MSH5-214ENST00000468602 COG5Q9UP83 839 aa11.84□□□□□ -0.51
MSH5-214ENST00000468602 DENND4AQ7Z401 1863 aa11.84□□□□□ -0.51
MSH5-214ENST00000468602 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 PIEZO1Q92508 2521 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 ZNF840PA6NDX5 716 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 LINC01565O15544 149 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 HSF2BPO75031 334 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 MOSPD3O75425 235 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 TADA3O75528 432 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 SOAT2O75908 522 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 ENDOD1O94919 500 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
MSH5-214ENST00000468602 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 CA8P35219 290 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 GALCP54803 685 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 GPC5P78333 572 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 MMS22LQ6ZRQ5 1243 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 GAREM2Q75VX8 874 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 Q7L0L9 218 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 SCD5Q86SK9 330 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 PASD1Q8IV76 773 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 SIX6OS1Q8N1H7 587 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.52
MSH5-214ENST00000468602 ULBP1Q9BZM6 244 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
MSH5-214ENST00000468602 ASAH2Q9NR71 780 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.52
MSH5-214ENST00000468602 ABCC13Q9NSE7 274 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
MSH5-214ENST00000468602 ADGRG1Q9Y653 693 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
MSH5-214ENST00000468602 SCINQ9Y6U3 715 aa11.83□□□□□ -0.52
MSH5-214ENST00000468602 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 DPYSL4O14531 572 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 FYNP06241 537 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 RHOP08100 348 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 FOSL2P15408 326 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 IGFBP4P22692 258 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 MTHFRP42898 656 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 VAV2P52735 878 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 TAF10Q12962 218 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 ACAP1Q15027 740 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 SPA17Q15506 151 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 RHOT2Q8IXI1 618 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 CENPIQ92674 756 aaPredicted RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 UBE2ZQ9H832 354 aaPredicted RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 TRPV4Q9HBA0 871 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 POPDC2Q9HBU9 364 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 ZNF334Q9HCZ1 680 aaPredicted RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
MSH5-214ENST00000468602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
MSH5-214ENST00000468602 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
MSH5-214ENST00000468602 TMEM191CA6NGB0 347 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 C2CD4BA6NLJ0 364 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 YJEFN3A6XGL0 299 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 E7ENQ6 273 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 DAB1O75553 588 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 IPO7O95373 1038 aaKnown RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 IGLV3-25P01717 112 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 LTFP02788 710 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 USP17L7P0C7H9 530 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 RRM1P23921 792 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 NOS2P35228 1153 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 MATKP42679 507 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 MAGEA1P43355 309 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 PTPN9P43378 593 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 RGS7P49802 495 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 YWHAGP61981 247 aaKnown RBP eCLIP11.81□□□□□ -0.52
MSH5-214ENST00000468602 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 MTA1Q13330 715 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 MTF1Q14872 753 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 ATAT1Q5SQI0 421 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CYP4A22Q5TCH4 519 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 SDHAF4Q5VUM1 108 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 BSPRYQ5W0U4 402 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CES5AQ6NT32 575 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 TADA2BQ86TJ2 420 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms