RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TEX264Q9Y6I9 313 aa16.45■□□□□ 0.22
TSPAN4-211ENST00000468468 H7C0C1 242 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 CCDC22O60826 627 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 AVILO75366 819 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 GJB1P08034 283 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 BGNP21810 368 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 ATP5OP48047 213 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 SLC18A2Q05940 514 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 ACAP1Q15027 740 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 NOMO1Q15155 1222 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 CHSY1Q86X52 802 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 CADM1Q9BY67 442 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 ELOVL4Q9GZR5 314 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 RPF1Q9H9Y2 349 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 KCNK13Q9HB14 408 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 M0QYV0 167 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 CYP2C8P10632 490 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 SERPINB3P29508 390 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 KCNJ11Q14654 390 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 KCTD2Q14681 263 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 PRKD1Q15139 912 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 TRIM68Q6AZZ1 485 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 RFWD3Q6PCD5 774 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 DPH6Q7L8W6 267 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 CFAP36Q96G28 342 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 NSL1Q96IY1 281 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 GPR20Q99678 358 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 TUBB6Q9BUF5 446 aa16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 RPL26L1Q9UNX3 145 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 MTO1Q9Y2Z2 717 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-211ENST00000468468 ACKR2O00590 384 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 LUC7L3O95232 432 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 NFICP08651 508 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 C1orf127Q8N9H9 656 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PTCD3Q96EY7 689 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 TMEM176AQ96HP8 235 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 FBXO6Q9NRD1 293 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PIK3R2O00459 728 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 ABL2P42684 1182 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 GABRB2P47870 512 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 CDK16Q00536 496 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 THEMIS2Q5TEJ8 643 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 C4orf50Q6ZRC1 276 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 SH2D5Q6ZV89 423 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PRPF39Q86UA1 669 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 SH3TC2Q8TF17 1288 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PRR11Q96HE9 360 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 RAB6BQ9NRW1 208 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PPME1Q9Y570 386 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 LRRC37A2A6NM11 1700 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 EIF4E1BA6NMX2 242 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 NOP56O00567 594 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 GAS2O43903 313 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 FAM155BO75949 473 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 UPP2O95045 317 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 TGDSO95455 350 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 ITGB3P05106 788 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 OSBPP22059 807 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PCK1P35558 622 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 GPD2P43304 727 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 PTDSS1P48651 473 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 ZNF143P52747 638 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 BLMHQ13867 455 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 CTAGE3PQ8IX95 158 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 TRAPPC12Q8WVT3 735 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 SKA1Q96BD8 255 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 CDT1Q9H211 546 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 FZD8Q9H461 694 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 DCLRE1BQ9H816 532 aa16.43■□□□□ 0.22
TSPAN4-211ENST00000468468 IGKV6-21A0A0C4DH24 114 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 C2orf71A6NGG8 1288 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 CHADO15335 359 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 CILPO75339 1184 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SPAG6O75602 509 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SMNDC1O75940 238 aaKnown RBP eCLIP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 ENDOD1O94919 500 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 IL18RAPO95256 599 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 LMNAP02545 664 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 DLDP09622 509 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 GPD1P21695 349 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 TFDP2Q14188 446 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 KHDC1Q4VXA5 237 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 CELF3Q5SZQ8 465 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms