RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRAV19A0A0A6YYK7 116 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 C2orf78A6NCI8 922 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 HHLA1C9JL84 531 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 MAN2B1O00754 1011 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 CLSTN1O94985 981 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 OAS1P00973 400 aaKnown RBP11.8□□□□□ -0.52
COL4A6-205ENST00000468338 USP17L7P0C7H9 530 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 YWHAQP27348 245 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 PDE6CP51160 858 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 SLC7A9P82251 487 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 ZXDBP98169 803 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 NHLH1Q02575 133 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 CUL2Q13617 745 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 AGERQ15109 404 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 ZNF77Q15935 545 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 ARHGAP17Q68EM7 881 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 C1orf228Q6PIY5 440 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 ZNF852Q6ZMS4 543 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 CLEC20AQ6ZU45 233 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 IRF2BP1Q8IU81 584 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 YAF2Q8IY57 180 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 SLITRK1Q96PX8 696 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 MED10Q9BTT4 135 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 IRF2BPLQ9H1B7 796 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 PNPLA8Q9NP80 782 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 FAM49BQ9NUQ9 324 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 ARHGAP26Q9UNA1 814 aa11.8□□□□□ -0.52
COL4A6-205ENST00000468338 HELZP42694 1942 aaKnown RBP11.8□□□□□ -0.52
COL4A6-205ENST00000468338 FAM170BA6NMN3 283 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 FGFR1OPO95684 399 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 DCNP07585 359 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 HDCP19113 662 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 CD58P19256 250 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 CD72P21854 359 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 TARSP26639 723 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 MAGEA9P43362 315 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 RPS9P46781 194 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 SLC5A3P53794 718 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 USP4Q13107 963 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 RALGPS2Q86X27 583 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 FAM122AQ96E09 287 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 CHFRQ96EP1 664 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 ZFYVE19Q96K21 471 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 GBP4Q96PP9 640 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 DUSP16Q9BY84 665 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 RNF38Q9H0F5 515 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 C8orf33Q9H7E9 229 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 HPS4Q9NQG7 708 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 GKN1Q9NS71 199 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 GTSE1Q9NYZ3 720 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 MRPS17Q9Y2R5 130 aaKnown RBP11.79□□□□□ -0.52
COL4A6-205ENST00000468338 PIAS3Q9Y6X2 628 aa11.79□□□□□ -0.52
COL4A6-205ENST00000468338 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 CKMP06732 381 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 FAM200BP0CF97 657 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 CCDC192P0DO97 292 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 TRIM21P19474 475 aaKnown RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 TBXAS1P24557 533 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 TUBP50607 506 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 KIF11P52732 1056 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 MAP3K7CLP57077 242 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 TNK2Q07912 1038 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 MTF1Q14872 753 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 DPCR1Q3MIW9 517 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 CT47A1Q5JQC4 288 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 EHBP1Q8NDI1 1231 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 CSGALNACT1Q8TDX6 532 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 FAM3CQ92520 227 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 HEXIM2Q96MH2 286 aaKnown RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 DNAI2Q9GZS0 605 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 FBXO44Q9H4M3 255 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A6-205ENST00000468338 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
COL4A6-205ENST00000468338 FANCMQ8IYD8 2048 aa11.77□□□□□ -0.52
COL4A6-205ENST00000468338 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 H0Y858 1186 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 NCAM2O15394 837 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 AFPP02771 609 aaKnown RBP11.77□□□□□ -0.53
COL4A6-205ENST00000468338 CHRNB1P11230 501 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms