RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 E2F8A0AVK6 867 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 LILRB5O75023 590 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 GNA14O95837 355 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 EGFP01133 1207 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 ACO1P21399 889 aaKnown RBP18.04■□□□□ 0.48
SSBP1-207ENST00000468267 YWHAEP62258 255 aaKnown RBP18.04■□□□□ 0.48
SSBP1-207ENST00000468267 ARHGAP17Q68EM7 881 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 NAIF1Q69YI7 327 aaPredicted RBP18.04■□□□□ 0.48
SSBP1-207ENST00000468267 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
SSBP1-207ENST00000468267 UBXN6Q9BZV1 441 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 C2orf42Q9NWW7 574 aa18.04■□□□□ 0.48
SSBP1-207ENST00000468267 P4HA2O15460 535 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 CYP26A1O43174 497 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 TLR5O60602 858 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 TBXAS1P24557 533 aaPredicted RBP18.03■□□□□ 0.48
SSBP1-207ENST00000468267 MARSP56192 900 aaKnown RBP18.03■□□□□ 0.48
SSBP1-207ENST00000468267 LRMPQ12912 555 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 UBR7Q8N806 425 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 ANKRD52Q8NB46 1076 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 SUMF1Q8NBK3 374 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 CD101Q93033 1021 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 CYLDQ9NQC7 956 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 TBC1D14Q9P2M4 693 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 USP3Q9Y6I4 520 aa18.03■□□□□ 0.48
SSBP1-207ENST00000468267 K7ESF4 209 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 SCAMP3O14828 347 aaKnown RBP18.02■□□□□ 0.48
SSBP1-207ENST00000468267 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
SSBP1-207ENST00000468267 TBX18O95935 607 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 CYP17A1P05093 508 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 CETN1Q12798 172 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 DHCR24Q15392 516 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 GAB4Q2WGN9 574 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 RHBDF2Q6PJF5 856 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 CCDC186Q7Z3E2 898 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 LMO3Q8TAP4 145 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 NT5C1BQ96P26 610 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 NACA2Q9H009 215 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 NMUR1Q9HB89 426 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 OSER1Q9NX31 292 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 RWDD2AQ9UIY3 292 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 KIAA1257Q9ULG3 409 aa18.02■□□□□ 0.48
SSBP1-207ENST00000468267 MYO18AQ92614 2054 aaKnown RBP18.02■□□□□ 0.47
SSBP1-207ENST00000468267 KIAA1549LQ6ZVL6 1849 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 A0A1W2PQH9 124 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 ATG13O75143 517 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
SSBP1-207ENST00000468267 OPRD1P41143 372 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 FBXO43Q4G163 708 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 SGO2Q562F6 1265 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 PKN3Q6P5Z2 889 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 ZNF276Q8N554 614 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 EHBP1Q8NDI1 1231 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 EZH1Q92800 747 aaPredicted RBP18.01■□□□□ 0.47
SSBP1-207ENST00000468267 OTUB2Q96DC9 234 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 KLF16Q9BXK1 252 aaPredicted RBP18.01■□□□□ 0.47
SSBP1-207ENST00000468267 EPC1Q9H2F5 836 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.01■□□□□ 0.47
SSBP1-207ENST00000468267 SH3BP1Q9Y3L3 701 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 CEP250Q9BV73 2442 aa18.01■□□□□ 0.47
SSBP1-207ENST00000468267 SDK1Q7Z5N4 2213 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 CHURC1-FNTBB4DL54 471 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 RNF40O75150 1001 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 AFPP02771 609 aaKnown RBP18■□□□□ 0.47
SSBP1-207ENST00000468267 CCDC192P0DO97 292 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 RARGP13631 454 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 HOXA6P31267 233 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 PSEN1P49768 467 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 SLC8A3P57103 927 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 DMWDQ09019 674 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 RAB41Q5JT25 222 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 KLHDC10Q6PID8 442 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 SCD5Q86SK9 330 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 PIGZQ86VD9 579 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 TTC30AQ86WT1 665 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 WBP2Q969T9 261 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 CLSTN2Q9H4D0 955 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 NAGPAQ9UK23 515 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18■□□□□ 0.47
SSBP1-207ENST00000468267 SPAG17Q6Q759 2223 aa18■□□□□ 0.47
SSBP1-207ENST00000468267 ADH1CP00326 375 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 IRF1P10914 325 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 VDRP11473 427 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 CD19P15391 556 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 FNTBP49356 437 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 GOLGA7BQ2TAP0 167 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 C10orf120Q5SQS8 335 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 HTR3DQ70Z44 454 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 BBS7Q8IWZ6 715 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 PPM1KQ8N3J5 372 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 MLKLQ8NB16 471 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 MED15Q96RN5 788 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 CLIC5Q9NZA1 410 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 DNMT3LQ9UJW3 386 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 TSPAN16Q9UKR8 245 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 PCDHB4Q9Y5E5 795 aa17.99■□□□□ 0.47
SSBP1-207ENST00000468267 XPO1O14980 1071 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms