RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ERICH1Q86X53 443 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 PDCL2Q8N4E4 241 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 ZNF248Q8NDW4 579 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 IGSF8Q969P0 613 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 OTUB2Q96DC9 234 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 MED8Q96G25 268 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 FUBP3Q96I24 572 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC3-203ENST00000467533 ACBD6Q9BR61 282 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 DNAJC17Q9NVM6 304 aaKnown RBP10.94□□□□□ -0.66
HDAC3-203ENST00000467533 USP36Q9P275 1121 aaKnown RBP10.94□□□□□ -0.66
HDAC3-203ENST00000467533 IL17BQ9UHF5 180 aa10.94□□□□□ -0.66
HDAC3-203ENST00000467533 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
HDAC3-203ENST00000467533 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-203ENST00000467533 ZNF840PA6NDX5 716 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 KCNJ18B7U540 433 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 H0Y8X5 98 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 CBX4O00257 560 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 OLFM2O95897 454 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 CDK4P11802 303 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 ANXA13P27216 316 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 ADSSP30520 456 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 OXTRP30559 389 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 GRIK1P39086 918 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
HDAC3-203ENST00000467533 USP46P62068 366 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 DNAJC3Q13217 504 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 LAYNQ6UX15 382 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 DENND5BQ6ZUT9 1274 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 CACUL1Q86Y37 369 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 TTC9Q92623 222 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 CNDP2Q96KP4 475 aaKnown RBP10.93□□□□□ -0.66
HDAC3-203ENST00000467533 PKMYT1Q99640 499 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 NTPCRQ9BSD7 190 aaKnown RBP10.93□□□□□ -0.66
HDAC3-203ENST00000467533 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 FAM117AQ9C073 453 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 SPHK2Q9NRA0 654 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 EHD2Q9NZN4 543 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 LRWD1Q9UFC0 647 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 L1RE1Q9UN81 338 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 DNM3Q9UQ16 869 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 ANKRD6Q9Y2G4 727 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 SH3BP1Q9Y3L3 701 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 C2CD2Q9Y426 696 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
HDAC3-203ENST00000467533 H0YCG3 227 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 LAD1O00515 517 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 TRIM66O15016 1216 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 HUS1O60921 280 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 LDOC1O95751 146 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 OAS1P00973 400 aaKnown RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 PNPLA4P41247 253 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 MAGEA11P43364 429 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 PPP3CCP48454 512 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 TPMTP51580 245 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 TRIM29Q14134 588 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 FUT11Q495W5 492 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 C6orf132Q5T0Z8 1188 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 C4orf50Q6ZRC1 276 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 C1orf186Q6ZWK4 172 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 ADAT2Q7Z6V5 191 aaKnown RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 METTL3Q86U44 580 aaKnown RBP10.92□□□□□ -0.66
HDAC3-203ENST00000467533 BBS7Q8IWZ6 715 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 SPATA17Q96L03 361 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 ASB7Q9H672 318 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 ITM2CQ9NQX7 267 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 SLCO1B1Q9Y6L6 691 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 MYH10P35580 1976 aa10.92□□□□□ -0.66
HDAC3-203ENST00000467533 A0A0B4J269 797 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 WASH3PC4AMC7 463 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 PRRT4C9JH25 899 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 NEDD8-MDP1E9PL57 170 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 GFRA2O00451 464 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 HCRTO43612 131 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 C1SP09871 688 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 IRF1P10914 325 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 ACADMP11310 421 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 GUCY2CP25092 1073 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 PCSK1P29120 753 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 CDC25AP30304 524 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 GRIA4P48058 902 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 ACADVLP49748 655 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 ACOT2P49753 483 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 NCKAP1LP55160 1127 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 NFATC3Q12968 1075 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 ZNF174Q15697 407 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 FBXL19Q6PCT2 694 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 FAM124AQ86V42 546 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 OSTM1Q86WC4 334 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 TMEM25Q86YD3 366 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 GATAD2AQ86YP4 633 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 ADGRF2Q8IZF7 708 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 TMEM86AQ8N2M4 240 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 PRCCQ92733 491 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-203ENST00000467533 MYLPFQ96A32 169 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 SIPA1Q96FS4 1042 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms