RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 C17orf99Q6UX52 265 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 YTHDF3Q7Z739 585 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 PCDH19Q8TAB3 1148 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 SNX25Q9H3E2 840 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 GDAP2Q9NXN4 497 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 RALGAPA2Q2PPJ7 1873 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 ATXN2Q99700 1313 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 MEIS3P2A8K0S8 358 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 H7C0C1 242 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 ATP2C2O75185 946 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 ATP5OP48047 213 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 TAF6P49848 677 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 IRF5Q13568 498 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 ANKRD20A8PQ5CZ79 823 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 PPP6R3Q5H9R7 873 aaPredicted RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
HPS1-208ENST00000467246 XPO7Q9UIA9 1087 aaKnown RBP11.92□□□□□ -0.5
HPS1-208ENST00000467246 TKTP29401 623 aaKnown RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 ARL4CP56559 192 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 LILRA4P59901 499 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 PDK2Q15119 407 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 FAM47CQ5HY64 1035 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 OSTM1Q86WC4 334 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 NDRG1Q92597 394 aaKnown RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 KIF9Q9HAQ2 790 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 TCP11X1B4DZS4 312 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 PTGESO14684 152 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 STIP1P31948 543 aaKnown RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 MAP2K2P36507 400 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 RGS2P41220 211 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 BCAT1P54687 386 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 PKN2Q16513 984 aaKnown RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 BBS9Q3SYG4 887 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 RIBC1Q8N443 379 aaPredicted RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 FBXO36Q8NEA4 188 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 TEKT4Q8WW24 435 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 C11orf84Q9BUA3 381 aaPredicted RBP11.91□□□□□ -0.5
HPS1-208ENST00000467246 BRCA2P51587 3418 aa11.91□□□□□ -0.5
HPS1-208ENST00000467246 NDC80O14777 642 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 APOL1O14791 398 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 HUS1O60921 280 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 SPAG7O75391 227 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 CTGFP29279 349 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 BCAR1P56945 870 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 EFTUD2Q15029 972 aaKnown RBP eCLIP11.9□□□□□ -0.55e-9■■■■■ 60.9
HPS1-208ENST00000467246 C3orf62Q6ZUJ4 267 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 TDRPQ86YL5 185 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 ZDHHC17Q8IUH5 632 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 TBCBQ99426 244 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 RABGEF1Q9UJ41 708 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 CLDN5O00501 218 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 TNPO2O14787 897 aaKnown RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 MDM4O15151 490 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 KCNN4O15554 427 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 RBL1P28749 1068 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 HOXC8P31273 242 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 PNPLA4P41247 253 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 SNX16P57768 344 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 ACTN3Q08043 901 aaPredicted RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 SLC9A4Q6AI14 798 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 CCDC121Q6ZUS5 278 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 IGDCC3Q8IVU1 814 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 APBA2Q99767 749 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 DHX35Q9H5Z1 703 aaKnown RBP11.9□□□□□ -0.5
HPS1-208ENST00000467246 Q9Y3F1 56 aa11.9□□□□□ -0.5
HPS1-208ENST00000467246 ACTL7BQ9Y614 415 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms