RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 PBX1P40424 430 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 LIFRP42702 1097 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 PDE6CP51160 858 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 RNASELQ05823 741 aaKnown RBP4.71□□□□□ -1.66
VPS13A-209ENST00000467124 CCNIQ14094 377 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 PRKD1Q15139 912 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-209ENST00000467124 MAPRE1Q15691 268 aaKnown RBP4.71□□□□□ -1.66
VPS13A-209ENST00000467124 LRRC24Q50LG9 513 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 CERCAMQ5T4B2 595 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM180BQ6P0A1 224 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 RSRC2Q7L4I2 434 aaKnown RBP4.71□□□□□ -1.66
VPS13A-209ENST00000467124 RASGRP2Q7LDG7 609 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 KRT73Q86Y46 540 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 ABRAQ8N0Z2 381 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 NAXEQ8NCW5 288 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 SPPL3Q8TCT6 385 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 ABHD5Q8WTS1 349 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 OSCP1Q8WVF1 389 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 GLG1Q92896 1179 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM136AQ96C01 138 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 R3HDM4Q96D70 268 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 PPM1MQ96MI6 270 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 CDK5RAP1Q96SZ6 601 aaKnown RBP4.71□□□□□ -1.66
VPS13A-209ENST00000467124 AMBRA1Q9C0C7 1298 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 AKIP1Q9NQ31 210 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 HELLSQ9NRZ9 838 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 SPATA31A3Q5VYP0 1347 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FER1L4A9Z1Z3 1794 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 A0A0G2JLL6 359 aaPredicted RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 K7ESM1 405 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 TRIAP1O43715 76 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 CFIP05156 583 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 CENPBP07199 599 aaPredicted RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 RBL1P28749 1068 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 HTR7P34969 479 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 MAGEA10P43363 369 aaPredicted RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 MTHFSP49914 203 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 PAPOLAP51003 745 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 BFSP2Q13515 415 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 GALNTL6Q49A17 601 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 ICE2Q659A1 982 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 RETSATQ6NUM9 610 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 TTLL10Q6ZVT0 673 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 MICALCLQ6ZW33 695 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 NRSN1Q8IZ57 195 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 SYNE4Q8N205 404 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 CPEB3Q8NE35 698 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 HMGB4Q8WW32 186 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 LPIN2Q92539 896 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 RRP36Q96EU6 259 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 DDX23Q9BUQ8 820 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 BDH2Q9BUT1 245 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 ZCWPW1Q9H0M4 648 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 RMI1Q9H9A7 625 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 GOLGA2P5Q9HBQ8 144 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 CNTN6Q9UQ52 1028 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 DRG1Q9Y295 367 aaKnown RBP4.7□□□□□ -1.66
VPS13A-209ENST00000467124 TESMINQ9Y4I5 508 aa4.7□□□□□ -1.66
VPS13A-209ENST00000467124 PRSS47A8MTI9 375 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 HMGB1P1B2RPK0 211 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 STX16-NPEPL1H3BU86 382 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 EXOC5O00471 708 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RNASET2O00584 256 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 STX16O14662 325 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 MUSKO15146 869 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 LPXNO60711 386 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 PRKCBP05771 671 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 CYP21A2P08686 494 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 ALADP13716 330 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 HOXA5P20719 270 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 BDNFP23560 247 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 ZFP36P26651 326 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 SLC5A2P31639 672 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RBM5P52756 815 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 ACTR2P61160 394 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 MPP1Q00013 466 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 SF3A3Q12874 501 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 TOB2Q14106 344 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 HLXQ14774 488 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 TRIM71Q2Q1W2 868 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 SPDYE7PQ495Y7 208 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 ANKRD40Q6AI12 368 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 SFRP4Q6FHJ7 346 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 MSANTD2Q6P1R3 559 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 NFRKBQ6P4R8 1299 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RAB11FIP2Q7L804 512 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 MAVSQ7Z434 540 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 TMPRSS6Q8IU80 811 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 SUPT20HQ8NEM7 779 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 TOR1AIP2Q8NFQ8 470 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 OR6Y1Q8NGX8 325 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 MBD3L2Q8NHZ7 208 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms