RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CCDC83Q8IWF9 413 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 SYTL1Q8IYJ3 562 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 CCDC33Q8N5R6 958 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 CTCFLQ8NI51 663 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 FRAT1Q92837 279 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 SCLYQ96I15 445 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF845Q96IR2 970 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 LRGUKQ96M69 825 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 CCDC138Q96M89 665 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 C16orf45Q96MC5 204 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 TMEM237Q96Q45 408 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 SLF1Q9BQI6 1058 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 DDX23Q9BUQ8 820 aaKnown RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 BOCQ9BWV1 1114 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 NT5C3AQ9H0P0 336 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 MEGF9Q9H1U4 602 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 OR10A5Q9H207 317 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 ACAD9Q9H845 621 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 PARVGQ9HBI0 331 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 TRIM39Q9HCM9 518 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 TUBA8Q9NY65 449 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-212ENST00000466845 TBC1D14Q9P2M4 693 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF711Q9Y462 761 aa6.08□□□□□ -1.44
LRCH3-212ENST00000466845 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 PTPN23Q9H3S7 1636 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 MAP3K19Q56UN5 1328 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 MAST1Q9Y2H9 1570 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 CEP170BQ9Y4F5 1589 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 A0A0G2JNJ9 132 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 PMS2P1A4D2B8 440 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 FAM83GA6ND36 823 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 TRIM75PA6NK02 468 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 A6NNZ2 444 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 SCDO00767 359 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 POP4O95707 220 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ASLP04424 464 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 POU2F2P09086 479 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 PDGFRAP16234 1089 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF3P17036 446 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 IGFALSP35858 605 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 HAAOP46952 286 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ALDH3A2P51648 485 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 CLNS1AP54105 237 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 DRG2P55039 364 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 SLC26A5P58743 744 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 IL13RA1P78552 427 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 BASP1P80723 227 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 KIF5AQ12840 1032 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 MAP3K12Q12852 859 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ADAM15Q13444 863 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 TUBA3CQ13748 450 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 BTG3Q14201 252 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 PUM1Q14671 1186 aaKnown RBP eCLIP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ICAM4Q14773 271 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 TMEM177Q53S58 311 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 DCAF17Q5H9S7 520 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 PDZD4Q76G19 769 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 KRT74Q7RTS7 529 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 SPATA21Q7Z572 469 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 RAB11FIP4Q86YS3 637 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 TMTC1Q8IUR5 882 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 CCDC170Q8IYT3 715 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 FAM9CQ8IZT9 166 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 NUP93Q8N1F7 819 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 CISD2Q8N5K1 135 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ANKRD52Q8NB46 1076 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 OR52K1Q8NGK4 314 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 SLC35B4Q969S0 331 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 FERMT2Q96AC1 680 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 MTMR9Q96QG7 549 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 MMRN2Q9H8L6 949 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 C1orf112Q9NSG2 853 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 EXTL2Q9UBQ6 330 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 Q9UFV3 132 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ST6GALNAC2Q9UJ37 374 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 COQ6Q9Y2Z9 468 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 CROCC2H7BZ55 1655 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 ZC3H13Q5T200 1668 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
LRCH3-212ENST00000466845 EIF2AK4Q9P2K8 1649 aaKnown RBP6.07□□□□□ -1.44
LRCH3-212ENST00000466845 STRCQ7RTU9 1775 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 FLT1P17948 1338 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 TRAV6A0A075B6T7 132 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CTAGE9A4FU28 777 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ZSCAN5CA6NGD5 496 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GOLGA8AA7E2F4 631 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 TXNL1O43396 289 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF189O75820 626 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GLRX3O76003 335 aaKnown RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 LARGE1O95461 756 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 HMGCRP04035 888 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CKBP12277 381 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GAP43P17677 238 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CYP2C19P33261 490 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 FNTBP49356 437 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 MNAT1P51948 309 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms