RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 RNF44Q7L0R7 432 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 BCDIN3DQ7Z5W3 292 aaKnown RBP4.68□□□□□ -1.66
VPS13D-203ENST00000466732 GALNT4Q8N4A0 578 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 SARGQ9BW04 601 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 ASIC5Q9NY37 505 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 DNAJB11Q9UBS4 358 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 PPP6CO00743 305 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 KIF3BO15066 747 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 TUBB4AP04350 444 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 CHRM5P08912 532 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-203ENST00000466732 SLC5A1P13866 664 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 ZNF543Q08ER8 600 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 FAM187BQ17R55 369 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 COBLL1Q53SF7 1204 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 MANEALQ5VSG8 457 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 RRAGBQ5VZM2 374 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 DENND2CQ68D51 928 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 MZT2AQ6P582 158 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 METTL25Q8N6Q8 603 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 C11orf44Q8N8P7 122 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 C8orf58Q8NAV2 365 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 IQCDQ96DY2 449 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 C5orf34Q96MH7 638 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 HIST1H2AAQ96QV6 131 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 SH2D3AQ9BRG2 576 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 SELENOOQ9BVL4 669 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 QTRT1Q9BXR0 403 aaKnown RBP4.67□□□□□ -1.66
VPS13D-203ENST00000466732 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 SNX15Q9NRS6 342 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 MGAT4CQ9UBM8 478 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 NKX1-2Q9UD57 310 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-203ENST00000466732 VPS51Q9UID3 782 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 HPSEQ9Y251 543 aa4.67□□□□□ -1.66
VPS13D-203ENST00000466732 WDR91A4D1P6 747 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 POM121BA6NF01 834 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 UBE2Q2LH0YL09 131 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 KPNA5O15131 536 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 THAP12O43422 761 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 TMPRSS11DO60235 418 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 SNX2O60749 519 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 MT-CO3P00414 261 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 PRR35P0CG20 571 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 CD19P15391 556 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 MCM5P33992 734 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 CASP5P51878 434 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 COPB1P53618 953 aaKnown RBP4.66□□□□□ -1.66
VPS13D-203ENST00000466732 SAFBQ15424 915 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS13D-203ENST00000466732 CERKLQ49MI3 558 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-203ENST00000466732 KLHDC7AQ5VTJ3 777 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 CLEC9AQ6UXN8 241 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 NEK8Q86SG6 692 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 ADAMTS18Q8TE60 1221 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 ZDHHC12Q96GR4 267 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 FYTTD1Q96QD9 318 aaKnown RBP4.66□□□□□ -1.66
VPS13D-203ENST00000466732 HEYLQ9NQ87 328 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-203ENST00000466732 STEAP1Q9UHE8 339 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
VPS13D-203ENST00000466732 A0A087WZ62 844 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 A8MVJ9 347 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 BTBD19C9JJ37 291 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 INO80B-WBP1J3KQ70 363 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 APAF1O14727 1248 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 GCATO75600 419 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 USP1O94782 785 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 CYP2A6P11509 494 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-203ENST00000466732 APEHP13798 732 aaKnown RBP4.65□□□□□ -1.67
VPS13D-203ENST00000466732 TRIM27P14373 513 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 PHKG2P15735 406 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 TSHRP16473 764 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 KELP23276 732 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 LMO1P25800 156 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 SSBP2P81877 361 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-203ENST00000466732 DEUP1Q05D60 604 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 ST3GAL2Q16842 350 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 MTX3Q5HYI7 312 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF626Q68DY1 528 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 SLC18B1Q6NT16 456 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 KRT28Q7Z3Y7 464 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 YTHDF3Q7Z739 585 aaKnown RBP4.65□□□□□ -1.67
VPS13D-203ENST00000466732 LIX1LQ8IVB5 337 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 LINC01465Q8N7H1 131 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 RNF152Q8N8N0 203 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 FAM227BQ96M60 508 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 ZCWPW1Q9H0M4 648 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 PDGFCQ9NRA1 345 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 ASAP1Q9ULH1 1129 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF804BA4D1E1 1349 aa4.65□□□□□ -1.67
VPS13D-203ENST00000466732 RBL1P28749 1068 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 HTR7P34969 479 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 PRIM2P49643 509 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 COPAP53621 1224 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 EIF4A1P60842 406 aaKnown RBP4.64□□□□□ -1.67
VPS13D-203ENST00000466732 FHL3Q13643 280 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 CLCA4Q14CN2 919 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 SUPT20HL1Q3ZLR7 823 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 CCAR1Q8IX12 1150 aaKnown RBP4.64□□□□□ -1.67
VPS13D-203ENST00000466732 GALNT16Q8N428 558 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms