RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PCDH9Q9HC56 1237 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 PCDH18Q9HCL0 1135 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 MYBPHLA2RUH7 354 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 GOLGA8MH3BSY2 632 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 ACADSBP45954 432 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 BRCC3P46736 316 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 CACNA2D1P54289 1103 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 PITX1P78337 314 aaPredicted RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 IFI35P80217 286 aaPredicted RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 GAD2Q05329 585 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 ADCY1Q08828 1119 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 UPP1Q16831 310 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 LONRF1Q17RB8 773 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 FOXR1Q6PIV2 292 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 DEFB106AQ8N104 65 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 CCHCR1Q8TD31 782 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 RSAD2Q8WXG1 361 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 FAM149B1Q96BN6 582 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TLCD1Q96CP7 247 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 RNF157Q96PX1 679 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 RHOBTB2Q9BYZ6 727 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 DNAI2Q9GZS0 605 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 F8W810 466 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 MCF2LO15068 1137 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 TTC4O95801 387 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 RBP3P10745 1247 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 ZSCAN26Q16670 478 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 BOLA3Q53S33 107 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 CTU1Q7Z7A3 348 aaKnown RBP14.14□□□□□ -0.15
UBE4B-206ENST00000466379 ZCCHC9Q8N567 271 aaKnown RBP14.14□□□□□ -0.15
UBE4B-206ENST00000466379 CCDC185Q8N715 623 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 PQLC3Q8N755 202 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 RBM15Q96T37 977 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBE4B-206ENST00000466379 SAYSD1Q9NPB0 183 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
UBE4B-206ENST00000466379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBE4B-206ENST00000466379 SYNJ2BP-COX16A0A087WUM0 186 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 A0A0U1RQF3 1178 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 BANF1O75531 89 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 FAM200BP0CF97 657 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 RPL22P35268 128 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PTPN9P43378 593 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 SULT1E1P49888 294 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 FASTKD3Q14CZ7 662 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 RNASEH2BQ5TBB1 312 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 ANKRD22Q5VYY1 191 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 CCDC33Q8N5R6 958 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PCDH19Q8TAB3 1148 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PCED1BQ96HM7 432 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 KCNK16Q96T55 309 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 DHX35Q9H5Z1 703 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 LRRC4Q9HBW1 653 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 TMEM30AQ9NV96 361 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 COX16Q9P0S2 106 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 HEY1Q9Y5J3 304 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 TDRD15B5MCY1 1934 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 RASGRF2O14827 1237 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 EIF3HO15372 352 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 RGS16O15492 202 aaPredicted RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 ZNF623O75123 536 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 AP1G2O75843 785 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 B3GAT3O94766 335 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 DESP17661 470 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 CTCFP49711 727 aaPredicted RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 SLC8A3P57103 927 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 MTM1Q13496 603 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PDK2Q15119 407 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 NOMO1Q15155 1222 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 CCDC38Q502W7 563 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 DARS2Q6PI48 645 aaKnown RBP14.13□□□□□ -0.15
UBE4B-206ENST00000466379 HFE2Q6ZVN8 426 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 FAM35AQ86V20 835 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 FAM131BQ86XD5 332 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 MAP7D3Q8IWC1 876 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 PLD5Q8N7P1 536 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 P3H4Q92791 437 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 CYLDQ9NQC7 956 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 TMPRSS4Q9NRS4 437 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 CTNNAL1Q9UBT7 734 aa14.13□□□□□ -0.15
UBE4B-206ENST00000466379 FOXO6A8MYZ6 492 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 H7C0C1 242 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 ITGB1P05556 798 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 CKBP12277 381 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 YY1P25490 414 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 HOXD10P28358 340 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 MDH1P40925 334 aaKnown RBP14.12□□□□□ -0.15
UBE4B-206ENST00000466379 MAGEA4P43358 317 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 ATP5OP48047 213 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 LHX1P48742 406 aa14.12□□□□□ -0.15
UBE4B-206ENST00000466379 RAB27AP51159 221 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms