RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NCK2O43639 380 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 FYNP06241 537 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 ABCB4P21439 1286 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 YWHAQP27348 245 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 SNX16P57768 344 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 KRT83P78385 493 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 SLC6A3Q01959 620 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 DLX2Q07687 328 aaPredicted RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 TAF10Q12962 218 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 TCEAL1Q15170 157 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 TAF5Q15542 800 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 SNX30Q5VWJ9 437 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 OR6B2Q6IFH4 312 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 TRNP1Q6NT89 227 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 ARCQ7LC44 396 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 C12orf76Q8N812 135 aaPredicted RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 OVCA2Q8WZ82 227 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 MSLNLQ96KJ4 702 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 NMUR1Q9HB89 426 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 DNMT3BQ9UBC3 853 aaKnown RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 CNOT8Q9UFF9 292 aaKnown RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
VCP-204ENST00000466100 TRIOO75962 3097 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 CCDC195A0A1B0GUA6 201 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 BTNL10A8MVZ5 291 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 GOLGA8SH3BPF8 625 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 XYLBO75191 536 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 MOSPD3O75425 235 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 MTA2O94776 668 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 GJB6O95452 261 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 LTFP02788 710 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 F11P03951 625 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 GLI1P08151 1106 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 HOXB8P17481 243 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 CCR2P41597 374 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 ARHGAP25P42331 645 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 GPC5P78333 572 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 IFRD2Q12894 506 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 MAMLD1Q13495 774 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 FAM102AQ5T9C2 384 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 DNAJC24Q6P3W2 148 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 ZNF662Q6ZS27 426 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 GAREM2Q75VX8 874 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 BEND5Q7L4P6 421 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 PHLDB2Q86SQ0 1253 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 MON1AQ86VX9 555 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 JOSD2Q8TAC2 188 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 SLC2A13Q96QE2 648 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 S1PR5Q9H228 398 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 LUC7LQ9NQ29 371 aaKnown RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 METTL5Q9NRN9 209 aaKnown RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 OSER1Q9NX31 292 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 COG5Q9UP83 839 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 PPP2R2CQ9Y2T4 447 aa11.69□□□□□ -0.54
VCP-204ENST00000466100 KIF26AQ9ULI4 1882 aaPredicted RBP11.69□□□□□ -0.54
VCP-204ENST00000466100 A0A0A6YYK5 440 aaPredicted RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 A0A1W2PQH9 124 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 SIGLEC16A6NMB1 481 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 HSF2BPO75031 334 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 DAB1O75553 588 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 ABL1P00519 1130 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 RHOP08100 348 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 CCDC175P0C221 793 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 FOSL2P15408 326 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 FLT3P36888 993 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 YWHAGP61981 247 aaKnown RBP eCLIP11.68□□□□□ -0.54
VCP-204ENST00000466100 RPL7AP62424 266 aaKnown RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 NTHL1P78549 312 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 SLC5A9Q2M3M2 681 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 EFHC1Q5JVL4 640 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 RARS2Q5T160 578 aaKnown RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 OTUD1Q5VV17 481 aaPredicted RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 GPR149Q86SP6 731 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 ELMOD1Q8N336 334 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 ZNF276Q8N554 614 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 PDZD8Q8NEN9 1154 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 SMG7Q92540 1137 aaKnown RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 SLITRK1Q96PX8 696 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms