RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TLR8Q9NR97 1041 aaKnown RBP12.27□□□□□ -0.45
CUX1-207ENST00000465461 ST7Q9NRC1 585 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 HEBP1Q9NRV9 189 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 GKN1Q9NS71 199 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 NAGPAQ9UK23 515 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 TECTAO75443 2155 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 NCOR1O75376 2440 aa12.27□□□□□ -0.45
CUX1-207ENST00000465461 LEFTY2O00292 366 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 TLR5O60602 858 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 OLFM2O95897 454 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 ZBED1O96006 694 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 IRF1P10914 325 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 CYP11B1P15538 503 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 CD72P21854 359 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 SOX9P48436 509 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 JAM2P57087 298 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
CUX1-207ENST00000465461 ARID5AQ03989 594 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 STILQ15468 1287 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 ZNF77Q15935 545 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 SLC44A4Q53GD3 710 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
CUX1-207ENST00000465461 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 C1orf131Q8NDD1 294 aaKnown RBP12.26□□□□□ -0.45
CUX1-207ENST00000465461 SLC20A1Q8WUM9 679 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 DEPDC1BQ8WUY9 529 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 KCTD13Q8WZ19 329 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 EDEM1Q92611 657 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 E2F7Q96AV8 911 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 SPAG5Q96R06 1193 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 NACA2Q9H009 215 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 LINC00597Q9H2U6 94 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 ARHGAP26Q9UNA1 814 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
CUX1-207ENST00000465461 YJEFN3A6XGL0 299 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 SOBPA7XYQ1 873 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 E7ENQ6 273 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 ARNTLO00327 626 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 STK25O00506 426 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 CAVIN2O95810 425 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 MMEP08473 750 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 ARSAP15289 507 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 RFX1P22670 979 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 KRT9P35527 623 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 SOX5P35711 763 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 STAT1P42224 750 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 UBASH3AP57075 661 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 SLC7A9P82251 487 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 FCHO2Q0JRZ9 810 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 ZNF268Q14587 947 aaPredicted RBP12.25□□□□□ -0.45
CUX1-207ENST00000465461 MTF1Q14872 753 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 PM20D1Q6GTS8 502 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
CUX1-207ENST00000465461 ZFRQ96KR1 1074 aaKnown RBP12.25□□□□□ -0.45
CUX1-207ENST00000465461 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
CUX1-207ENST00000465461 OBP2AQ9NY56 170 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 CFAP97Q9P2B7 532 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 WNT16Q9UBV4 365 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 ZMYM5Q9UJ78 669 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
CUX1-207ENST00000465461 OTOL1A6NHN0 477 aaPredicted RBP12.24□□□□□ -0.45
CUX1-207ENST00000465461 E5RJQ4 531 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 CHADO15335 359 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 PI15O43692 258 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 GPR37L1O60883 481 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 HMBSP08397 361 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 ATP5C1P36542 298 aaKnown RBP12.24□□□□□ -0.45
CUX1-207ENST00000465461 DAOAP59103 153 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 BPIFB4P59827 614 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 ZNF445P59923 1031 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 EFEMP1Q12805 493 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 USP4Q13107 963 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 C2CD6Q53TS8 623 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 C10orf120Q5SQS8 335 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 BSPRYQ5W0U4 402 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 BTBD8Q5XKL5 378 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 CC2D1AQ6P1N0 951 aaPredicted RBP12.24□□□□□ -0.45
CUX1-207ENST00000465461 TPRG1Q6ZUI0 275 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 CACNA2D4Q7Z3S7 1137 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 MIB1Q86YT6 1006 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 IRF7Q92985 503 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 PIWIL1Q96J94 861 aaKnown RBP12.24□□□□□ -0.45
CUX1-207ENST00000465461 HSFY1Q96LI6 401 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 CPXM1Q96SM3 734 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 FAM83CQ9BQN1 747 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 C1QTNF1Q9BXJ1 281 aa12.24□□□□□ -0.45
CUX1-207ENST00000465461 KLF16Q9BXK1 252 aaPredicted RBP12.24□□□□□ -0.45
CUX1-207ENST00000465461 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms