RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 PDCLQ13371 301 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TANGO2Q6ICL3 276 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 PPP1R2P3Q6NXS1 205 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 PMF1Q6P1K2 205 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 POTEHQ6S545 545 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 SARM1Q6SZW1 724 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 VITQ6UXI7 678 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 MSANTD4Q8NCY6 345 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 BPIFB1Q8TDL5 484 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 USP13Q92995 863 aaPredicted RBP14.41□□□□□ -0.1
LIMD1-203ENST00000465039 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
LIMD1-203ENST00000465039 KXD1Q9BQD3 176 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
LIMD1-203ENST00000465039 C1QTNF1Q9BXJ1 281 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 OLA1Q9NTK5 396 aaKnown RBP14.41□□□□□ -0.1
LIMD1-203ENST00000465039 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TMEM51Q9NW97 253 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TRIOO75962 3097 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 C2orf78A6NCI8 922 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 HEPACAM2A8MVW5 462 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 GLI1P08151 1106 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 GLULP15104 373 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 SCNN1AP37088 669 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 KLK7P49862 253 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 CDR2Q01850 454 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 TRIM14Q14142 442 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 PDGFRLQ15198 375 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 YAF2Q8IY57 180 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 TMEM35BQ8NCS4 154 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 UBA3Q8TBC4 463 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
LIMD1-203ENST00000465039 SYN2Q92777 582 aaPredicted RBP14.4□□□□□ -0.1
LIMD1-203ENST00000465039 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 ULBP1Q9BZM6 244 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 TRPC7Q9HCX4 862 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
LIMD1-203ENST00000465039 NOCTQ9UK39 431 aaKnown RBP14.4□□□□□ -0.1
LIMD1-203ENST00000465039 TECTAO75443 2155 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 TULP2O00295 520 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 DLL1O00548 723 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 COCHO43405 550 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 VIPR2P41587 438 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 DAOAP59103 153 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 YWHAGP61981 247 aaKnown RBP eCLIP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 IFRD2Q12894 506 aaPredicted RBP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 ZNF77Q15935 545 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 DENND1BQ6P3S1 775 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 BMP8AQ7Z5Y6 402 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 SCD5Q86SK9 330 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 IPO4Q8TEX9 1081 aaKnown RBP14.39□□□□□ -0.11
LIMD1-203ENST00000465039 RSAD2Q8WXG1 361 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 BAP1Q92560 729 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 OTUB2Q96DC9 234 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 NACA2Q9H009 215 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 ASNSD1Q9NWL6 643 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 IFNKQ9P0W0 207 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 DNMT3LQ9UJW3 386 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 NAGPAQ9UK23 515 aa14.39□□□□□ -0.11
LIMD1-203ENST00000465039 E2F8A0AVK6 867 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 ARNTLO00327 626 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 ZNF263O14978 683 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 GFPT2O94808 682 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 PRKCIP41743 596 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 KPNA1P52294 538 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 PRKCQQ04759 706 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 NNTQ13423 1086 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 MTF1Q14872 753 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 CC2D1AQ6P1N0 951 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 NOP9Q86U38 636 aaKnown RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 ARL14EPQ8N8R7 260 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 ZNF397Q8NF99 534 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 RSPRY1Q96DX4 576 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 SHDQ96IW2 340 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 SLC22A12Q96S37 553 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 BRD9Q9H8M2 597 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 NMUR1Q9HB89 426 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 TBC1D14Q9P2M4 693 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 CHORDC1Q9UHD1 332 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 STRIP2Q9ULQ0 834 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIMD1-203ENST00000465039 COL4A2P08572 1712 aa14.38□□□□□ -0.11
LIMD1-203ENST00000465039 F5P12259 2224 aa14.37□□□□□ -0.11
LIMD1-203ENST00000465039 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
LIMD1-203ENST00000465039 GPR37L1O60883 481 aa14.37□□□□□ -0.11
LIMD1-203ENST00000465039 ABL1P00519 1130 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms