RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 SCFD1Q8WVM8 642 aa24.62■■□□□ 1.53
SSNA1-203ENST00000463511 ZNF516Q92618 1163 aa24.62■■□□□ 1.53
SSNA1-203ENST00000463511 GZF1Q9H116 711 aaPredicted RBP24.62■■□□□ 1.53
SSNA1-203ENST00000463511 XYLT2Q9H1B5 865 aa24.62■■□□□ 1.53
SSNA1-203ENST00000463511 EXOC1Q9NV70 894 aa24.62■■□□□ 1.53
SSNA1-203ENST00000463511 UBE4BO95155 1302 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 CDX4O14627 284 aaPredicted RBP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 COCHO43405 550 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 FAM163BP0C2L3 166 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 IRX4P78413 519 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 LY6G5CQ5SRR4 150 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 ARMCX6Q7L4S7 300 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 GPT2Q8TD30 523 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 WHAMMQ8TF30 809 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 ERCC4Q92889 916 aaPredicted RBP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 ZFRQ96KR1 1074 aaKnown RBP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 SPACA7Q96KW9 195 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 SMYD3Q9H7B4 428 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 POLMQ9NP87 494 aaPredicted RBP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 SLC39A2Q9NP94 309 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 BCCIPQ9P287 314 aaKnown RBP eCLIP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 TBC1D14Q9P2M4 693 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 HOOK1Q9UJC3 728 aaKnown RBP24.61■■□□□ 1.53
SSNA1-203ENST00000463511 ASPMQ8IZT6 3477 aa24.61■■□□□ 1.53
SSNA1-203ENST00000463511 RHOBTB3O94955 611 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 RTN3O95197 1032 aaPredicted RBP24.6■■□□□ 1.53
SSNA1-203ENST00000463511 STAU1O95793 577 aaKnown RBP24.6■■□□□ 1.53
SSNA1-203ENST00000463511 P2RY2P41231 377 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 GRIA2P42262 883 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 KIR2DL1P43626 348 aaPredicted RBP24.6■■□□□ 1.53
SSNA1-203ENST00000463511 CASP4P49662 377 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 FOXC1Q12948 553 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 HSF5Q4G112 596 aaPredicted RBP24.6■■□□□ 1.53
SSNA1-203ENST00000463511 EOGTQ5NDL2 527 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 FRMD1Q8N878 549 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 PDZD8Q8NEN9 1154 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 SPATA20Q8TB22 786 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 HMGB4Q8WW32 186 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 KCNK16Q96T55 309 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 PCDHA5Q9Y5H7 936 aa24.6■■□□□ 1.53
SSNA1-203ENST00000463511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 E2F8A0AVK6 867 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.59■■□□□ 1.53
SSNA1-203ENST00000463511 MAP3K13O43283 966 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 ADAM23O75077 832 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 PHACTR2O75167 634 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 CLSTN1O94985 981 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 CDH8P55286 799 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 STK4Q13043 487 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 UAP1L1Q3KQV9 507 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 LPCAT2Q7L5N7 544 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 FAM35AQ86V20 835 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 TMEFF1Q8IYR6 380 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 PHTF2Q8N3S3 785 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 SCAMP5Q8TAC9 235 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 OVCA2Q8WZ82 227 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 CCDC47Q96A33 483 aaKnown RBP24.59■■□□□ 1.53
SSNA1-203ENST00000463511 SYAP1Q96A49 352 aaPredicted RBP24.59■■□□□ 1.53
SSNA1-203ENST00000463511 CHORDC1Q9UHD1 332 aaPredicted RBP24.59■■□□□ 1.53
SSNA1-203ENST00000463511 ATP8B3O60423 1300 aa24.59■■□□□ 1.53
SSNA1-203ENST00000463511 IGF2RP11717 2491 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 A0A0A0MRY4 1105 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 TCRBV21S2A2A0A5A6 115 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 ATICP31939 592 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 PTGER3P43115 390 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 TNFRSF4P43489 277 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 SNRPFP62306 86 aaKnown RBP24.58■■□□□ 1.53
SSNA1-203ENST00000463511 TRIM61Q5EBN2 209 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 HECTD3Q5T447 861 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 SCARA5Q6ZMJ2 495 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 NAT16Q8N8M0 369 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 KIAA0895Q8NCT3 520 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 ELMO3Q96BJ8 720 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 MED10Q9BTT4 135 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 CCSER2Q9H7U1 834 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 EVLQ9UI08 416 aaPredicted RBP24.58■■□□□ 1.53
SSNA1-203ENST00000463511 MBD1Q9UIS9 605 aaPredicted RBP24.58■■□□□ 1.53
SSNA1-203ENST00000463511 SH3BP1Q9Y3L3 701 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 WDFY3Q8IZQ1 3526 aa24.58■■□□□ 1.53
SSNA1-203ENST00000463511 ATXN2Q99700 1313 aaKnown RBP24.58■■□□□ 1.52
SSNA1-203ENST00000463511 C1QTNF9BB2RNN3 333 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 SMC2O95347 1197 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 PROS1P07225 676 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 C1QTNF9P0C862 333 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 SPINK2P20155 84 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 SLC5A3P53794 718 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 GAD2Q05329 585 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 BIRC3Q13489 604 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 CAMK4Q16566 473 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 ZNF699Q32M78 642 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 PAQR9Q6ZVX9 377 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 BBS7Q8IWZ6 715 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 PGBD3Q8N328 593 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 SMARCE1Q969G3 411 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 OTUB2Q96DC9 234 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 GSDMAQ96QA5 445 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 DMAP1Q9NPF5 467 aaPredicted RBP24.57■■□□□ 1.52
SSNA1-203ENST00000463511 AKAP13Q12802 2813 aa24.57■■□□□ 1.52
SSNA1-203ENST00000463511 PCNX2A6NKB5 2137 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 TNFRSF10BO14763 440 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms