RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 OR1G1P47890 313 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 GSCP56915 257 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 HYAL1Q12794 435 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TUSC3Q13454 348 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 SLC29A2Q14542 456 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 ODF2Q5BJF6 829 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 RCOR2Q8IZ40 523 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 VPS52Q8N1B4 723 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TMEM35BQ8NCS4 154 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 CCHCR1Q8TD31 782 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 PABPC5Q96DU9 382 aaKnown RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 RBM41Q96IZ5 413 aaKnown RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 PPP1R10Q96QC0 940 aaKnown RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 CDCA3Q99618 268 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TCF25Q9BQ70 676 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 COLEC11Q9BWP8 271 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 OSBPL8Q9BZF1 889 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TRIM7Q9C029 511 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 CXCL16Q9H2A7 254 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 RASSF4Q9H2L5 321 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 SEMA4AQ9H3S1 761 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 FAM169AQ9Y6X4 670 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 VCANP13611 3396 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 COL4A4P53420 1690 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-207ENST00000463477 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 SMIM28A0A1B0GU29 152 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CST3P01034 146 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CALCAP01258 141 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CTSAP10619 480 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 KCNE1P15382 129 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TNFSF9P41273 254 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 KCNJ1P48048 391 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TAS2R40P59535 323 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 OSTNP61366 133 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 MRPS5P82675 430 aaKnown RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ADAM15Q13444 863 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 AAK1Q2M2I8 961 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 SLC10A6Q3KNW5 377 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 PPP1R15BQ5SWA1 713 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TTC19Q6DKK2 380 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 MMS22LQ6ZRQ5 1243 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 RNF168Q8IYW5 571 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CCDC89Q8N998 374 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ELMO3Q96BJ8 720 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 LHX5Q9H2C1 402 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CCDC134Q9H6E4 229 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CHST7Q9NS84 486 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CNTN3Q9P232 1028 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 STRIP2Q9ULQ0 834 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 FAM170AA1A519 330 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 C2orf71A6NGG8 1288 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 RGS16O15492 202 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CXCL14O95715 111 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TNNC2P02585 160 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 SHBGP04278 402 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CFHP08603 1231 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 RALAP11233 206 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 MYL6P60660 151 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TRPC3Q13507 836 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 PIGHQ14442 188 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ERMARDQ5T6L9 678 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 POLNQ7Z5Q5 900 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 GPR65Q8IYL9 337 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 FNIP1Q8TF40 1166 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 C1orf54Q8WWF1 131 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ANKRD36BP1Q96IX9 119 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 SNX27Q96L92 541 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ASB2Q96Q27 587 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TSPAN18Q96SJ8 248 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 HERPUD2Q9BSE4 406 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 VN1R3Q9BXE9 311 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 BCO2Q9BYV7 579 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 MTMR12Q9C0I1 747 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 XYLT2Q9H1B5 865 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 TLE6Q9H808 572 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ENTPD7Q9NQZ7 604 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 SLC38A7Q9NVC3 462 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 MARCH5Q9NX47 278 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ASIC3Q9UHC3 531 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 ADAM28Q9UKQ2 775 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 DRG1Q9Y295 367 aaKnown RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 EFR3BQ9Y2G0 817 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 PRG3Q9Y2Y8 225 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-207ENST00000463477 CEP83Q9Y592 693 aa10.38□□□□□ -0.75
PTPRD-207ENST00000463477 PDCD11Q14690 1871 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 PLXNA4Q9HCM2 1894 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms