RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 BEST1O76090 585 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 APBB3O95704 486 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 ZDHHC11BP0C7U3 371 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 ADH5P11766 374 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 HOXC13P31276 330 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 EIF2DP41214 584 aaKnown RBP23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 ZNF658Q5TYW1 1059 aaPredicted RBP23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 CLEC20AQ6ZU45 233 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 CACNA2D4Q7Z3S7 1137 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 TTC39CQ8N584 583 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 FBXL13Q8NEE6 735 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 JAKMIP2Q96AA8 810 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 TWNKQ96RR1 684 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 PNPLA8Q9NP80 782 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 RALGAPA1Q6GYQ0 2036 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 AXIN1O15169 862 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 FOXD2O60548 495 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 TGM1P22735 817 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 SEC13P55735 322 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 GOLGA8FQ08AF8 430 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 GOLGA8DPQ0D2H9 430 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 SMARCE1Q969G3 411 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 EEF2KMTQ96G04 330 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 FAXDC2Q96IV6 333 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 ZFRQ96KR1 1074 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 PNKPQ96T60 521 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 PCDHA5Q9Y5H7 936 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 DMXL1Q9Y485 3027 aa23.42■■□□□ 1.34
PDLIM7-206ENST00000463411 EML5Q05BV3 1969 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 CEP250Q9BV73 2442 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 SLC16A3O15427 465 aaKnown RBP23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 APODP05090 189 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 IRF1P10914 325 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 PRCPP42785 496 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 GAB4Q2WGN9 574 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 COBLL1Q53SF7 1204 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 DCAF17Q5H9S7 520 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 TCERG1LQ5VWI1 586 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 BTBD8Q5XKL5 378 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 RHBDF2Q6PJF5 856 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 ELOA2Q8IYF1 753 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 TSTD1Q8NFU3 115 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 USP33Q8TEY7 942 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 LOXL4Q96JB6 756 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 SEMA4GQ9NTN9 838 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 POLR3BQ9NW08 1133 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 RAB20Q9NX57 234 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 SCML2Q9UQR0 700 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 DCHS1Q96JQ0 3298 aa23.41■■□□□ 1.34
PDLIM7-206ENST00000463411 SPAG17Q6Q759 2223 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 K7EQS6 105 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 ACO1P21399 889 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 GAD2Q05329 585 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 CSRP2Q16527 193 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 C2orf27AQ580R0 203 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 GPRIN1Q7Z2K8 1008 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 GPT2Q8TD30 523 aa23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 DUSP9Q99956 384 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 LSM7Q9UK45 103 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-206ENST00000463411 CYP26A1O43174 497 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 ATP5C1P36542 298 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 MCCD1P59942 119 aaPredicted RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 MRPS21P82921 87 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 FKBP3Q00688 224 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 LRRC63Q05C16 580 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 STIM1Q13586 685 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 PREPLQ4J6C6 727 aaPredicted RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 ZNF394Q53GI3 561 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 LY6G5CQ5SRR4 150 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 PRR23CQ6ZRP0 262 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 WHAMMQ8TF30 809 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 HEXIM2Q96MH2 286 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 FAM124BQ9H5Z6 455 aaPredicted RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 CYLDQ9NQC7 956 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 ARHGEF4Q9NR80 690 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 EBF1Q9UH73 591 aa23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-206ENST00000463411 HHLA1C9JL84 531 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 KAT7O95251 611 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 DGKEP52429 567 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 KDSRQ06136 332 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 TADA2BQ86TJ2 420 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 KBTBD6Q86V97 674 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 BBS7Q8IWZ6 715 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 NETO1Q8TDF5 533 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 SEMA4DQ92854 862 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 RTKNQ9BST9 563 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 DUSP16Q9BY84 665 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 CISHQ9NSE2 258 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 MMP17Q9ULZ9 603 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 CACNA1AO00555 2505 aa23.38■■□□□ 1.33
PDLIM7-206ENST00000463411 MYOFQ9NZM1 2061 aa23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 HOXC11O43248 304 aaPredicted RBP23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 EPN2O95208 641 aa23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 GRIA2P42262 883 aa23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 SLC6A11P48066 632 aa23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 PSEN1P49768 467 aa23.37■■□□□ 1.33
PDLIM7-206ENST00000463411 ELF2Q15723 593 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms