RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 MROH9Q5TGP6 573 aa13.26□□□□□ -0.29
NUP58-206ENST00000463407 ERAP2Q6P179 960 aa13.26□□□□□ -0.29
NUP58-206ENST00000463407 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
NUP58-206ENST00000463407 SLC20A1Q8WUM9 679 aa13.26□□□□□ -0.29
NUP58-206ENST00000463407 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
NUP58-206ENST00000463407 DNAJC8O75937 253 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CCDC60Q8IWA6 550 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 WDR18Q9BV38 432 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 TRAF3IP3Q9Y228 551 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CRTAMO95727 393 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ITGALP20701 1170 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 BDNFP23560 247 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 PTPN7P35236 360 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 HNRNPH2P55795 449 aaKnown RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 RD3Q7Z3Z2 195 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 SH2D3CQ8N5H7 860 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ABHD8Q96I13 439 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 AGXT2Q9BYV1 514 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 RNF112Q9ULX5 631 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 NCKAP1Q9Y2A7 1128 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 PLA2G4AP47712 749 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 BTKQ06187 659 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 FBXL16Q8N461 479 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 NOP53Q9NZM5 478 aaKnown RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 SPASTQ9UBP0 616 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CDYLQ9Y232 598 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 SYCE1LA8MT33 242 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ADCY6O43306 1168 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CYP3A4P08684 503 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ATP6V1E1P36543 226 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 GEMIN4P57678 1058 aaKnown RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 ERMARDQ5T6L9 678 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 PATL1Q86TB9 770 aaKnown RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 NT5DC4Q86YG4 428 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 CARNS1A5YM72 827 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 OR1E1P30953 314 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 FLT3LGP49771 235 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 ST13P4Q8IZP2 240 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 LGI2Q8N0V4 545 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 KIAA0895Q8NCT3 520 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 KLF6Q99612 283 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 MARCOQ9UEW3 520 aaPredicted RBP13.25□□□□□ -0.29
NUP58-206ENST00000463407 GGT7Q9UJ14 662 aa13.25□□□□□ -0.29
NUP58-206ENST00000463407 NCF1BA6NI72 391 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 NCF1CA8MVU1 366 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 NCF1P14598 390 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 RENBPP51606 427 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 MMGT1Q8N4V1 131 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 SLC2A14Q8TDB8 520 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 PNKPQ96T60 521 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CHUKO15111 745 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 FNTAP49354 379 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 HPCAP84074 193 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 KDSRQ06136 332 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 FAM83EQ2M2I3 478 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 AGBL2Q5U5Z8 902 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CCDC149Q6ZUS6 474 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 UROC1Q96N76 676 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CLPBQ9H078 707 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 VIPAS39Q9H9C1 493 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 JCHAINP01591 159 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 RRM1P23921 792 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 MAPK9P45984 424 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CDH8P55286 799 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 C6orf203Q9P0P8 240 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 RPS6KL1Q9Y6S9 549 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 TLL1O43897 1013 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 VPS26AO75436 327 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 TRIM16O95361 564 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 ELNP15502 786 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CYP2F1P24903 491 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 PEX19P40855 299 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 PMS1P54277 932 aaKnown RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 EIF2B5Q13144 721 aaKnown RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 VSIG10LQ86VR7 867 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 KIRREL3Q8IZU9 778 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 LPCAT1Q8NF37 534 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 ATG4AQ8WYN0 398 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 HES6Q96HZ4 224 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 PORCNQ9H237 461 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms