RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CDX4O14627 284 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAPK13O15264 365 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CALUO43852 315 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 RHOBTB1O94844 696 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 VNN1O95497 513 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 NFATC1O95644 943 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CAVIN2O95810 425 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 OAS1P00973 400 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CST3P01034 146 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 TNNC2P02585 160 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 C4BPAP04003 597 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PROS1P07225 676 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 KRT19P08727 400 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 C1QTNF9P0C862 333 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 BDNFP23560 247 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 NR2F2P24468 414 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PCSK1P29120 753 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 LHX1P48742 406 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 NOVA1P51513 510 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 DGKEP52429 567 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PMS1P54277 932 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CACNA2D1P54289 1103 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 SEC13P55735 322 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 DLG4P78352 724 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 SLC7A9P82251 487 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 RBP5P82980 135 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 C2orf27AQ580R0 203 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 ANO7Q6IWH7 933 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 VSTM1Q6UX27 236 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 C12orf40Q86WS4 652 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 SCN4BQ8IWT1 228 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CCDC127Q96BQ5 260 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CCDC34Q96HJ3 373 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PCED1BQ96HM7 432 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 RNF38Q9H0F5 515 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 XYLT2Q9H1B5 865 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CDH9Q9ULB4 789 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 CABIN1Q9Y6J0 2220 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRIM49BA6NDI0 452 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZNF840PA6NDX5 716 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 SCAMP3O14828 347 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 KIF20AO95235 890 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 SMC2O95347 1197 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 STAU1O95793 577 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TOP3BO95985 862 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRIM49P0CI25 452 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRIM49CP0CI26 452 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 PFKLP17858 780 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 HDCP19113 662 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TNNI1P19237 187 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 SPINK2P20155 84 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 WARSP23381 471 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 GBP1P32455 592 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 SLC6A11P48066 632 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 NOP14P78316 857 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 MORC3Q14149 939 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CRY1Q16526 586 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 EDRF1Q3B7T1 1238 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CEP135Q66GS9 1140 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 UNQ6494/PRO21346Q6UXR6 183 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 C4orf50Q6ZRC1 276 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 DPH6Q7L8W6 267 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 FILIP1Q7Z7B0 1213 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CCDC33Q8N5R6 958 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 FRMD1Q8N878 549 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 IL17RCQ8NAC3 791 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMC2Q8TDI7 906 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 EXOC4Q96A65 974 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 ELMO3Q96BJ8 720 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 EEF2KMTQ96G04 330 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 HPDLQ96IR7 371 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZFRQ96KR1 1074 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CEP295NLQ96MC4 621 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 FNBP1Q96RU3 617 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 MRPL45Q9BRJ2 306 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 DPEP3Q9H4B8 488 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 VRTNQ9H8Y1 702 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAGEC2Q9UBF1 373 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 CPQQ9Y646 472 aa8.42□□□□□ -1.06
CDC42BPA-210ENST00000462553 KALRNO60229 2985 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 NUMA1Q14980 2115 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM131Q92545 1883 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 PPP1R3GB7ZBB8 358 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 F8VP50 259 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 SGK1O00141 431 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADAM23O75077 832 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 CSRP1P21291 193 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 P2RY2P41231 377 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 KIR2DL1P43626 348 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 PDE6CP51160 858 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms