RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PDXKO00764 312 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 TNFRSF10BO14763 440 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 HOXC11O43248 304 aaPredicted RBP16.28■□□□□ 0.2
SKA3-204ENST00000462482 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
SKA3-204ENST00000462482 TLR5O60602 858 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 KRT37O76014 449 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 NR3C1P04150 777 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 MYL1P05976 194 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 FAM200BP0CF97 657 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 BCKDHBP21953 392 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 P2RY2P41231 377 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 NDST1P52848 882 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 STK4Q13043 487 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 C12orf40Q86WS4 652 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 GRAMD1CQ8IYS0 662 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 FUKQ8N0W3 1084 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 OLIG1Q8TAK6 271 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 SLC2A14Q8TDB8 520 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 PAGE5Q96GU1 130 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
SKA3-204ENST00000462482 NUSAP1Q9BXS6 441 aaKnown RBP16.28■□□□□ 0.2
SKA3-204ENST00000462482 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 IL37Q9NZH6 218 aa16.28■□□□□ 0.2
SKA3-204ENST00000462482 LNP1A1A4G5 178 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 IKBKBO14920 756 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 TULP3O75386 442 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 CCDC130P13994 396 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 KIR2DL1P43626 348 aaPredicted RBP16.27■□□□□ 0.2
SKA3-204ENST00000462482 MAP3K7CLP57077 242 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 SHC2P98077 582 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 ZACNQ401N2 412 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 SPDYCQ5MJ68 293 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 C10orf76Q5T2E6 689 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 EMC10Q5UCC4 262 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 GRAMD4Q6IC98 578 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 PAQR9Q6ZVX9 377 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 BBS7Q8IWZ6 715 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 ZNF513Q8N8E2 541 aaPredicted RBP16.27■□□□□ 0.2
SKA3-204ENST00000462482 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 TMEM174Q8WUU8 243 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 RLN3Q8WXF3 142 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 ZFRQ96KR1 1074 aaKnown RBP16.27■□□□□ 0.2
SKA3-204ENST00000462482 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.2
SKA3-204ENST00000462482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.2
SKA3-204ENST00000462482 RCOR1Q9UKL0 485 aa16.27■□□□□ 0.2
SKA3-204ENST00000462482 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 FAM92AA1XBS5 289 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 VNN1O95497 513 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 ZDHHC11BP0C7U3 371 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 KRT13P13646 458 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 ADORA2BP29275 332 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 ATP5C1P36542 298 aaKnown RBP16.26■□□□□ 0.19
SKA3-204ENST00000462482 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
SKA3-204ENST00000462482 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 TRIM61Q5EBN2 209 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 LYSMD4Q5XG99 296 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 SV2AQ7L0J3 742 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 ARMCX6Q7L4S7 300 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 SYT12Q8IV01 421 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 TMEFF1Q8IYR6 380 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 TERB1Q8NA31 727 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 SMOQ99835 787 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 SDCBP2Q9H190 292 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 FAM49BQ9NUQ9 324 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
SKA3-204ENST00000462482 EVLQ9UI08 416 aaPredicted RBP16.26■□□□□ 0.19
SKA3-204ENST00000462482 ANTXRLA6NF34 631 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 AP5Z1O43299 807 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 ACTN4O43707 911 aaKnown RBP16.25■□□□□ 0.19
SKA3-204ENST00000462482 KLRC4O43908 158 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 HLA-DRAP01903 254 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 HOXB2P14652 356 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 HNRNPLP14866 589 aaKnown RBP eCLIP16.25■□□□□ 0.19
SKA3-204ENST00000462482 NTSR1P30989 418 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 ATXN3P54252 364 aaPredicted RBP16.25■□□□□ 0.19
SKA3-204ENST00000462482 DLG4P78352 724 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 ORC1Q13415 861 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 SH3PXD2AQ5TCZ1 1133 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 SLC36A4Q6YBV0 504 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 HTR3DQ70Z44 454 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 RABEPKQ7Z6M1 372 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 TMEM25Q86YD3 366 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 SFTPA1Q8IWL2 248 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 ETFBKMTQ8IXQ9 262 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 NT5C1AQ9BXI3 368 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 KCTD10Q9H3F6 313 aa16.25■□□□□ 0.19
SKA3-204ENST00000462482 SLC32A1Q9H598 525 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms