RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SERPING1P05155 500 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 UNGP13051 313 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-221ENST00000462352 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 CDC25BP30305 580 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 PSEN1P49768 467 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 CLEC16AQ2KHT3 1053 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 CNGA4Q8IV77 575 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 ZDHHC14Q8IZN3 488 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 ZSCAN18Q8TBC5 510 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-221ENST00000462352 IPO4Q8TEX9 1081 aaKnown RBP12.39□□□□□ -0.43
CPNE1-221ENST00000462352 CLEC4CQ8WTT0 213 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 IRGQQ8WZA9 623 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 OSER1Q9NX31 292 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 ZMYM5Q9UJ78 669 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 BZW2Q9Y6E2 419 aaKnown RBP12.39□□□□□ -0.43
CPNE1-221ENST00000462352 OBSL1O75147 1896 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 MYO16Q9Y6X6 1858 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 UNC80Q8N2C7 3258 aa12.39□□□□□ -0.43
CPNE1-221ENST00000462352 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 E7ENQ6 273 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SLC34A2O95436 690 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 OAS1P00973 400 aaKnown RBP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 ERBB2P04626 1255 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 PLEKP08567 350 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 AVPR1AP37288 418 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 GABRB2P47870 512 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 TUBP50607 506 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SNX16P57768 344 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 CENPCQ03188 943 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 HECTD3Q5T447 861 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 WDR59Q6PJI9 974 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 DRC7Q8IY82 874 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 ARHGAP18Q8N392 663 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SLC30A5Q8TAD4 765 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 ASB16Q96NS5 453 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SLC22A12Q96S37 553 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 CYP2S1Q96SQ9 504 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPNE1-221ENST00000462352 CLIC5Q9NZA1 410 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 ARHGAP20Q9P2F6 1191 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
CPNE1-221ENST00000462352 DENND4CQ5VZ89 1909 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 TRAV19A0A0A6YYK7 116 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 SART1O43290 800 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 TLR5O60602 858 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 PRAMEF12O95522 483 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 OLFM2O95897 454 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 LTFP02788 710 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 CKMP06732 381 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 RARGP13631 454 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 PFKLP17858 780 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 HDCP19113 662 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 MMP8P22894 467 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 FCARP24071 287 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 WEE1P30291 646 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 C2CD6Q53TS8 623 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 BTBD8Q5XKL5 378 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 FAM183BPQ6ZVS7 135 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 MSANTD4Q8NCY6 345 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 ST13P5Q8NFI4 369 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 FGF14Q92915 247 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 C18orf8Q96DM3 657 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 PIWIL1Q96J94 861 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 C11orf70Q9BRQ4 267 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 RNF38Q9H0F5 515 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 ZNHIT6Q9NWK9 470 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
CPNE1-221ENST00000462352 ANAPC1Q9H1A4 1944 aa12.37□□□□□ -0.43
CPNE1-221ENST00000462352 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
CPNE1-221ENST00000462352 ANHXE9PGG2 379 aa12.36□□□□□ -0.43
CPNE1-221ENST00000462352 COCHO43405 550 aa12.36□□□□□ -0.43
CPNE1-221ENST00000462352 TBX18O95935 607 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms