RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TLR5O60602 858 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 TBX18O95935 607 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 MBL2P11226 248 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 ATP1A3P13637 1013 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 GLULP15104 373 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 ZNF165P49910 485 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 PMF1Q6P1K2 205 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 BHLHA9Q7RTU4 235 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 PJA1Q8NG27 643 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 OSCP1Q8WVF1 389 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 ZNF606Q8WXB4 792 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 SECISBP2LQ93073 1101 aaKnown RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 LSM14BQ9BX40 385 aaKnown RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 ULBP1Q9BZM6 244 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 MTF2Q9Y483 593 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 OTOL1A6NHN0 477 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ZBED1O96006 694 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 TPM2P07951 284 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-206ENST00000462306 RARGP13631 454 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ARSAP15289 507 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 UCHL3P15374 230 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
ERCC3-206ENST00000462306 RFX1P22670 979 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 GNA15P30679 374 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 USP8P40818 1118 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 GPD2P43304 727 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 SOX9P48436 509 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 PSEN1P49768 467 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 IQCB1Q15051 598 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 PDGFRLQ15198 375 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 MEA1Q16626 185 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 SKOR2Q2VWA4 1001 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ITPRIPL2Q3MIP1 535 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ZNF276Q8N554 614 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 KIAA1958Q8N8K9 716 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 OSBPL6Q9BZF3 934 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 LINC00597Q9H2U6 94 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 C8orf33Q9H7E9 229 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-206ENST00000462306 LRRC4Q9HBW1 653 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 LTB4R2Q9NPC1 389 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 CLIC5Q9NZA1 410 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 CFAP97Q9P2B7 532 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 NAGPAQ9UK23 515 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 WNT6Q9Y6F9 365 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 F5P12259 2224 aa16.67■□□□□ 0.26
ERCC3-206ENST00000462306 SMTNL1A8MU46 457 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 MAN2B1O00754 1011 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 THAP12O43422 761 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 TARSP26639 723 aaKnown RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 CLCN1P35523 988 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 ATP5C1P36542 298 aaKnown RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 RGS7P49802 495 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 KLK7P49862 253 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 KPNA1P52294 538 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 RUNX3Q13761 415 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 DRAP1Q14919 205 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 EML3Q32P44 896 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 FKBP15Q5T1M5 1219 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 DENND1BQ6P3S1 775 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 DDX42Q86XP3 938 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 FAM71AQ8IYT1 594 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 SCML4Q8N228 414 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 NDRG1Q92597 394 aaKnown RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 NELL2Q99435 816 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 KLF16Q9BXK1 252 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 GANQ9H2C0 597 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 DUS2Q9NX74 493 aaKnown RBP16.66■□□□□ 0.26
ERCC3-206ENST00000462306 NUDT5Q9UKK9 219 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
ERCC3-206ENST00000462306 FAM170BA6NMN3 283 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 MED7O43513 233 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
ERCC3-206ENST00000462306 CTHP32929 405 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 IFNAR2P48551 515 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 RPL34P49207 117 aaKnown RBP16.65■□□□□ 0.26
ERCC3-206ENST00000462306 YWHAGP61981 247 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERCC3-206ENST00000462306 FZD5Q13467 585 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 RAPGEF1Q13905 1077 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
ERCC3-206ENST00000462306 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms