RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 LRRC63Q05C16 580 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 CEP68Q76N32 757 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 ERMP1Q7Z2K6 904 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 TTC39CQ8N584 583 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 USP33Q8TEY7 942 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 ACDQ96AP0 544 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 OTUB2Q96DC9 234 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 DUSP9Q99956 384 aaKnown RBP20.01■□□□□ 0.79
VARS-220ENST00000461874 NACA2Q9H009 215 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 SH3BP1Q9Y3L3 701 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 ACO1P21399 889 aaKnown RBP20■□□□□ 0.79
VARS-220ENST00000461874 SLC6A11P48066 632 aa20■□□□□ 0.79
VARS-220ENST00000461874 DMC1Q14565 340 aa20■□□□□ 0.79
VARS-220ENST00000461874 CBWD6Q4V339 395 aa20■□□□□ 0.79
VARS-220ENST00000461874 ZNF394Q53GI3 561 aa20■□□□□ 0.79
VARS-220ENST00000461874 DCAF17Q5H9S7 520 aaPredicted RBP20■□□□□ 0.79
VARS-220ENST00000461874 CBWD3Q5JTY5 395 aa20■□□□□ 0.79
VARS-220ENST00000461874 CBWD5Q5RIA9 395 aa20■□□□□ 0.79
VARS-220ENST00000461874 PPP1R26Q5T8A7 1209 aaPredicted RBP20■□□□□ 0.79
VARS-220ENST00000461874 TCERG1LQ5VWI1 586 aa20■□□□□ 0.79
VARS-220ENST00000461874 GAB3Q8WWW8 586 aa20■□□□□ 0.79
VARS-220ENST00000461874 TATDN2Q93075 761 aa20■□□□□ 0.79
VARS-220ENST00000461874 JAKMIP2Q96AA8 810 aa20■□□□□ 0.79
VARS-220ENST00000461874 HEXIM2Q96MH2 286 aaKnown RBP20■□□□□ 0.79
VARS-220ENST00000461874 HHIPQ96QV1 700 aa20■□□□□ 0.79
VARS-220ENST00000461874 DUSP16Q9BY84 665 aa20■□□□□ 0.79
VARS-220ENST00000461874 FAM124BQ9H5Z6 455 aaPredicted RBP20■□□□□ 0.79
VARS-220ENST00000461874 CYLDQ9NQC7 956 aa20■□□□□ 0.79
VARS-220ENST00000461874 CISHQ9NSE2 258 aa20■□□□□ 0.79
VARS-220ENST00000461874 DLL3Q9NYJ7 618 aa20■□□□□ 0.79
VARS-220ENST00000461874 USP18Q9UMW8 372 aa20■□□□□ 0.79
VARS-220ENST00000461874 COQ4Q9Y3A0 265 aa20■□□□□ 0.79
VARS-220ENST00000461874 SDK1Q7Z5N4 2213 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 TRIM49BA6NDI0 452 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 CYP26A1O43174 497 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 LRP3O75074 770 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 RPP40O75818 363 aaKnown RBP19.99■□□□□ 0.79
VARS-220ENST00000461874 TBX18O95935 607 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 ADH5P11766 374 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 EIF2DP41214 584 aaKnown RBP19.99■□□□□ 0.79
VARS-220ENST00000461874 KIF11P52732 1056 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 SPEM2Q0P670 501 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 PUM1Q14671 1186 aaKnown RBP eCLIP19.99■□□□□ 0.79
VARS-220ENST00000461874 RSPO4Q2I0M5 234 aaPredicted RBP19.99■□□□□ 0.79
VARS-220ENST00000461874 LY6G5CQ5SRR4 150 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.99■□□□□ 0.79
VARS-220ENST00000461874 BBS7Q8IWZ6 715 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 FAM160A2Q8N612 972 aaPredicted RBP19.99■□□□□ 0.79
VARS-220ENST00000461874 WBP2Q969T9 261 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 PNKPQ96T60 521 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 ARID3AQ99856 593 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 OSER1Q9NX31 292 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 DNAH14Q0VDD8 3507 aa19.99■□□□□ 0.79
VARS-220ENST00000461874 A0A0A0MRY4 1105 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 AXIN1O15169 862 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 APBB3O95704 486 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 ATP5C1P36542 298 aaKnown RBP19.98■□□□□ 0.79
VARS-220ENST00000461874 RAD23BP54727 409 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 SEC13P55735 322 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 LMNB2Q03252 620 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 MESP2Q0VG99 397 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 STIM1Q13586 685 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 C2orf27AQ580R0 203 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 C12orf40Q86WS4 652 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 SLC4A11Q8NBS3 891 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 TMEM176AQ96HP8 235 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 DHTKD1Q96HY7 919 aaPredicted RBP19.98■□□□□ 0.79
VARS-220ENST00000461874 KLF16Q9BXK1 252 aaPredicted RBP19.98■□□□□ 0.79
VARS-220ENST00000461874 NMUR1Q9HB89 426 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 ARMCX3Q9UH62 379 aaPredicted RBP19.98■□□□□ 0.79
VARS-220ENST00000461874 EBF1Q9UH73 591 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 MAN1B1Q9UKM7 699 aa19.98■□□□□ 0.79
VARS-220ENST00000461874 A0A1W2PQH9 124 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 ANTXRLA6NF34 631 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 PSMA7O14818 248 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 GREM1O60565 184 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 IRF1P10914 325 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
VARS-220ENST00000461874 ARHGAP8P85298 464 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 GAD2Q05329 585 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 ISM2Q6H9L7 571 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 KLHDC10Q6PID8 442 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 HTR3DQ70Z44 454 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 CCDC186Q7Z3E2 898 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 CACNA2D4Q7Z3S7 1137 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.97■□□□□ 0.79
VARS-220ENST00000461874 USP3Q9Y6I4 520 aa19.97■□□□□ 0.79
VARS-220ENST00000461874 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.96■□□□□ 0.79
VARS-220ENST00000461874 HOXC11O43248 304 aaPredicted RBP19.96■□□□□ 0.79
VARS-220ENST00000461874 KAT7O95251 611 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 APODP05090 189 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 RARGP13631 454 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 SDHBP21912 280 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 GRIA2P42262 883 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 MRPS21P82921 87 aaKnown RBP19.96■□□□□ 0.79
VARS-220ENST00000461874 ARHGAP17Q68EM7 881 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 DGLUCYQ7Z3D6 616 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms