RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NLNQ9BYT8 704 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 MIEF1Q9NQG6 463 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 SH3GLB1Q9Y371 365 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 PDS5AQ29RF7 1337 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PSMD12O00232 456 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 STX11O75558 287 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GRK4P32298 578 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 IFNGR2P38484 337 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 OXCT1P55809 520 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 OTUD4Q01804 1114 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GRIK3Q13003 919 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ACAD10Q6JQN1 1059 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 XRRA1Q6P2D8 792 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 EID3Q8N140 333 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 UBA3Q8TBC4 463 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 MIEF2Q96C03 454 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 HPDLQ96IR7 371 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 HMG20AQ9NP66 347 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 UBQLN1Q9UMX0 589 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 FLT1P17948 1338 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 HBP1O60381 514 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ATG7O95352 703 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 FASP25445 335 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 SMTNL2Q2TAL5 461 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 DENND5BQ6ZUT9 1274 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 SLC13A5Q86YT5 568 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PHACTR4Q8IZ21 702 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ZCCHC7Q8N3Z6 543 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 NEK6Q9HC98 313 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 TRPM5Q9NZQ8 1165 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ATP6V1HQ9UI12 483 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ARAP3Q8WWN8 1544 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 FOXN1O15353 648 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 DYNC1LI2O43237 492 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 MYBP10242 640 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 MYL12AP19105 171 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 NOS3P29474 1203 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PRKCEQ02156 737 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 NR1I3Q14994 352 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 DGUOKQ16854 277 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 COMMD2Q86X83 199 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 S100A13Q99584 98 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 CCDC3Q9BQI4 270 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ROGDIQ9GZN7 287 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ELOVL6Q9H5J4 265 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 WHRNQ9P202 907 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GTF3C4Q9UKN8 822 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PRR23AA6NEV1 266 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 SLC25A27O95847 323 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 STAG3L1P0CL83 205 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 HMGCS2P54868 508 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 TBCELQ5QJ74 424 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 CD302Q8IX05 232 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PDLIM2Q96JY6 352 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 RPRD1AQ96P16 312 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-205ENST00000461221 TINF2Q9BSI4 451 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 PHF20Q9BVI0 1012 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 NCKIPSDQ9NZQ3 722 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 POLR1DQ9Y2S0 133 aa9.27□□□□□ -0.93
BRCA1-205ENST00000461221 GSG1L2A8MUP6 293 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 WWP2O00308 870 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 UPP2O95045 317 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 C6orf222P0C671 652 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 HSD17B3P37058 310 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PLIN5Q00G26 463 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 GNA13Q14344 377 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PDPK2PQ6A1A2 396 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 LPCAT2Q7L5N7 544 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ZFRQ96KR1 1074 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ZSWIM1Q9BR11 485 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM79Q9BSE2 394 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 BDH2Q9BUT1 245 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TRPC4Q9UBN4 977 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 COL15A1P39059 1388 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TRIM43BA6NCK2 446 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NCF1BA6NI72 391 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NCF1CA8MVU1 366 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 M0QYT0 321 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 KRT6AP02538 564 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 MPOP05164 745 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NCF1P14598 390 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PSMD4P55036 377 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CCZ1BP86790 482 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CCZ1P86791 482 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 MTMR2Q13614 643 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NAA30Q147X3 362 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TRMT5Q32P41 509 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 KLHDC7AQ5VTJ3 777 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TDRD5Q8NAT2 981 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms