RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 USP33Q8TEY7 942 aa14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 NELFBQ8WX92 580 aa14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 MRPS31Q92665 395 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 TRMT2BQ96GJ1 504 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 APOBEC3GQ9HC16 384 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 CRTAC1Q9NQ79 661 aa14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 ADAMTS20P59510 1910 aa14.52□□□□□ -0.09
SCAMP4-206ENST00000460767 ASCC3Q8N3C0 2202 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CSH1P0DML2 217 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CSH2P0DML3 217 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 EPB41P11171 864 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 BCKDHBP21953 392 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 PCSK1P29120 753 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 MYL7Q01449 175 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 INCA1Q0VD86 236 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 PAK1Q13153 545 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 STIM1Q13586 685 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 NFE2Q16621 373 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CBWD6Q4V339 395 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CBWD3Q5JTY5 395 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CBWD5Q5RIA9 395 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 NAIF1Q69YI7 327 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 KRT39Q6A163 491 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 SLC23A3Q6PIS1 610 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 IRF2BP1Q8IU81 584 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 MLKLQ8NB16 471 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 SEMA4DQ92854 862 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 FUBP3Q96I24 572 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 MYRFLQ96LU7 910 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 TSG101Q99816 390 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 NUSAP1Q9BXS6 441 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 NUP62CLQ9H1M0 184 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 UXTQ9UBK9 157 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 KLK13Q9UKR3 277 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 CDH9Q9ULB4 789 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 MMP17Q9ULZ9 603 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 ABCA7Q8IZY2 2146 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 PCDH15Q96QU1 1955 aa14.51□□□□□ -0.09
SCAMP4-206ENST00000460767 BICDL2A1A5D9 508 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ATP2C2O75185 946 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TADA3O75528 432 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 KRT13P13646 458 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 P2RY2P41231 377 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 MAGEA11P43364 429 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TSPY1Q01534 308 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 BIRC3Q13489 604 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TRPC3Q13507 836 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 HNRNPDQ14103 355 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TAF12Q16514 161 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ZNF699Q32M78 642 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 EML3Q32P44 896 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 HSF5Q4G112 596 aaPredicted RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TRIM61Q5EBN2 209 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TXNDC8Q6A555 127 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 SYT12Q8IV01 421 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 TRIM59Q8IWR1 403 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 DCP1BQ8IZD4 617 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ELMO3Q96BJ8 720 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 SMYD3Q9H7B4 428 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 METTL14Q9HCE5 456 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 DUS2Q9NX74 493 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ARMCX3Q9UH62 379 aaPredicted RBP14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 GTF3C4Q9UKN8 822 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 GPSM3Q9Y4H4 160 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 LAMA1P25391 3075 aa14.5□□□□□ -0.09
SCAMP4-206ENST00000460767 ANAPC1Q9H1A4 1944 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 PCNX2A6NKB5 2137 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 NOL4O94818 638 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 CHRM1P11229 460 aaPredicted RBP14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 MXI1P50539 228 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 CDH8P55286 799 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 NR1H3Q13133 447 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 CRY1Q16526 586 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 DPCR1Q3MIW9 517 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 ZNF667Q5HYK9 610 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 SPOPLQ6IQ16 392 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 KLHL10Q6JEL2 608 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 CRYBG2Q8N1P7 616 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 LMO3Q8TAP4 145 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 GIPC2Q8TF65 315 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 PCED1BQ96HM7 432 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 SYT15Q9BQS2 421 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 FAM124BQ9H5Z6 455 aaPredicted RBP14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 TMEM30AQ9NV96 361 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 CTNND2Q9UQB3 1225 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 PCDHB5Q9Y5E4 795 aa14.49□□□□□ -0.09
SCAMP4-206ENST00000460767 K7EQS6 105 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 PHACTR2O75167 634 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 USP17L7P0C7H9 530 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 ENGP17813 658 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 PFKLP17858 780 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 RDXP35241 583 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 GNL1P36915 607 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 IFNAR2P48551 515 aa14.48□□□□□ -0.09
SCAMP4-206ENST00000460767 DHPSP49366 369 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms