RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 TRIM62Q9BVG3 475 aa12.5□□□□□ -0.41
CPNE6-202ENST00000460657 SLCO1B3Q9NPD5 702 aa12.5□□□□□ -0.41
CPNE6-202ENST00000460657 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TAF6P49848 677 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 BCAT1P54687 386 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CDK16Q00536 496 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 USP10Q14694 798 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 RNPEPL1Q9HAU8 725 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 ADA2Q9NZK5 511 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CSDE1O75534 798 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 KRT34O76011 436 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 RIPK1Q13546 671 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TASP1Q9H6P5 420 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 RRN3P2A6NIE6 340 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 NEMP1O14524 444 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 VTNP04004 478 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 PMLP29590 882 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 ESRRGP62508 458 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 IRX1P78414 480 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 LRRC36Q1X8D7 754 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 SLC7A14Q8TBB6 771 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 MAGEC3Q8TD91 643 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 SLCO2A1Q92959 643 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 ACO2Q99798 780 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 NSMCE4AQ9NXX6 385 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 E2F8A0AVK6 867 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CHADO15335 359 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 APOEP02649 317 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 INSRRP14616 1297 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 KCNA2P16389 499 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TSPY1Q01534 308 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CPNE8Q86YQ8 564 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 APLFQ8IW19 511 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 LRRC39Q96DD0 335 aa12.49□□□□□ -0.41
CPNE6-202ENST00000460657 SUDS3Q9H7L9 328 aaPredicted RBP12.49□□□□□ -0.41
CPNE6-202ENST00000460657 DFFAO00273 331 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 ZNF862O60290 1169 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 KRT16P08779 473 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 GRK2P25098 689 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 CA8P35219 290 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 TRIP10Q15642 601 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 AMHR2Q16671 573 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 CATSPER1Q8NEC5 780 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 EXT2Q93063 718 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 MAGEB5Q9BZ81 275 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 MROH8Q9H579 483 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 EFR3BQ9Y2G0 817 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 DNAJC16Q9Y2G8 782 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 ENO4A6NNW6 628 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 E5RJQ4 531 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 M0QYT0 321 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 BANF1O75531 89 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 RARBP10826 455 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 CYP2C9P11712 490 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 KIF19Q2TAC6 998 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 NKD2Q969F2 451 aaPredicted RBP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 RASSF9O75901 435 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 TOMM70O94826 608 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 RBL1P28749 1068 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 ZNF143P52747 638 aaPredicted RBP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 JAG1P78504 1218 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 BNIP1Q12981 228 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 EFTUD2Q15029 972 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 TRMT5Q32P41 509 aaKnown RBP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 SLC30A9Q6PML9 568 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 ZDHHC17Q8IUH5 632 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 TRIML2Q8N7C3 387 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 PPHLN1Q8NEY8 458 aaKnown RBP12.48□□□□□ -0.41
CPNE6-202ENST00000460657 RIPK3Q9Y572 518 aa12.48□□□□□ -0.41
CPNE6-202ENST00000460657 DHX15O43143 795 aaKnown RBP12.47□□□□□ -0.41
CPNE6-202ENST00000460657 PRPF4O43172 522 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPNE6-202ENST00000460657 DYNC1LI2O43237 492 aaPredicted RBP12.47□□□□□ -0.41
CPNE6-202ENST00000460657 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
CPNE6-202ENST00000460657 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
CPNE6-202ENST00000460657 C16orf89Q6UX73 402 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms