RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RNF38Q9H0F5 515 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 NDST4Q9H3R1 872 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 DUS2Q9NX74 493 aaKnown RBP15.75■□□□□ 0.11
ATG4B-213ENST00000460211 GTSE1Q9NYZ3 720 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 NCDNQ9UBB6 729 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 TSPAN16Q9UKR8 245 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 CPQQ9Y646 472 aa15.75■□□□□ 0.11
ATG4B-213ENST00000460211 NCOR2Q9Y618 2525 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 LEFTY2O00292 366 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 SLC9A3R1O14745 358 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-213ENST00000460211 OLFM2O95897 454 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 RALAP11233 206 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 KRT5P13647 590 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 BST2Q10589 180 aaKnown RBP15.74■□□□□ 0.11
ATG4B-213ENST00000460211 USP4Q13107 963 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 RUNX3Q13761 415 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 CNGA2Q16280 664 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 SMYD5Q6GMV2 418 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 TRIM65Q6PJ69 517 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 PIGZQ86VD9 579 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 ARHGAP18Q8N392 663 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 CPA6Q8N4T0 437 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 RBBP8NLQ8NC74 664 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-213ENST00000460211 TTC8Q8TAM2 541 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 KAT5Q92993 513 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 CDK5RAP1Q96SZ6 601 aaKnown RBP15.74■□□□□ 0.11
ATG4B-213ENST00000460211 EBF3Q9H4W6 596 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 LRRC4Q9HBW1 653 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 SMPD4Q9NXE4 827 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 DLL3Q9NYJ7 618 aa15.74■□□□□ 0.11
ATG4B-213ENST00000460211 NDRG2Q9UN36 371 aaKnown RBP15.74■□□□□ 0.11
ATG4B-213ENST00000460211 SPECC1L-ADORA2AF8WAN1 911 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 O00370 1275 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 XPO1O14980 1071 aaKnown RBP15.73■□□□□ 0.11
ATG4B-213ENST00000460211 COCHO43405 550 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 TLR5O60602 858 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 SETSIPP0DME0 302 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 SLC9A1P19634 815 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 PTMSP20962 102 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 ATP5C1P36542 298 aaKnown RBP15.73■□□□□ 0.11
ATG4B-213ENST00000460211 TNK2Q07912 1038 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 GOLGA8FQ08AF8 430 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 GOLGA8DPQ0D2H9 430 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 TCP11X2Q5H9J9 407 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 LCLAT1Q6UWP7 414 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 GPRIN1Q7Z2K8 1008 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 CCDC186Q7Z3E2 898 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 ANKRD20A12PQ8NF67 263 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 KREMEN1Q96MU8 473 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 NAT10Q9H0A0 1025 aaKnown RBP15.73■□□□□ 0.11
ATG4B-213ENST00000460211 SAMSN1Q9NSI8 373 aaKnown RBP15.73■□□□□ 0.11
ATG4B-213ENST00000460211 TBC1D14Q9P2M4 693 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 APEX2Q9UBZ4 518 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 SH3BP1Q9Y3L3 701 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 USP3Q9Y6I4 520 aa15.73■□□□□ 0.11
ATG4B-213ENST00000460211 NUP210Q8TEM1 1887 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-213ENST00000460211 GPR179Q6PRD1 2367 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CYP26A1O43174 497 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 MED7O43513 233 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 NFATC1O95644 943 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
ATG4B-213ENST00000460211 PON1P27169 355 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CTHP32929 405 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 PDE4CQ08493 712 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 TRIM68Q6AZZ1 485 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 TSSK4Q6SA08 328 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 TTC30AQ86WT1 665 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 UBA3Q8TBC4 463 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 ATRIPQ8WXE1 791 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CLDN23Q96B33 292 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CNTNAP3BQ96NU0 1288 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CNTNAP3Q9BZ76 1288 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CCSER2Q9H7U1 834 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CYLDQ9NQC7 956 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CFAP97Q9P2B7 532 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 CNTN6Q9UQ52 1028 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 MYH10P35580 1976 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 GREB1Q4ZG55 1949 aa15.72■□□□□ 0.11
ATG4B-213ENST00000460211 ZNF638Q14966 1978 aaKnown RBP15.71■□□□□ 0.11
ATG4B-213ENST00000460211 DENND4CQ5VZ89 1909 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 A0A1W2PQH9 124 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 E2F8A0AVK6 867 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 M0QYV0 167 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 RNF225M0QZC1 329 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-213ENST00000460211 ZBED1O96006 694 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 RARGP13631 454 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 ARSAP15289 507 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 BRD2P25440 801 aaKnown RBP15.71■□□□□ 0.11
ATG4B-213ENST00000460211 USP8P40818 1118 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 RPS9P46781 194 aaKnown RBP15.71■□□□□ 0.11
ATG4B-213ENST00000460211 PLA2G4AP47712 749 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 SOX9P48436 509 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 TKTL1P51854 596 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 MYL5Q02045 173 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 LRRC32Q14392 662 aa15.71■□□□□ 0.11
ATG4B-213ENST00000460211 ARHGAP44Q17R89 818 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms