RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 FCGR1AP12314 374 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ATF4P18848 351 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ELK3P41970 407 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 GSSP48637 474 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 TPTEP56180 551 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ABATP80404 500 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CSTF3Q12996 717 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 NME3Q13232 169 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 KLHL12Q53G59 568 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 DENND1BQ6P3S1 775 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 MARCH7Q9H992 704 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CYP4F12Q9HCS2 524 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 EHD3Q9NZN3 535 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PMF1-BGLAPU3KQ54 211 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 KANSL1LA0AUZ9 987 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 NOTOA8MTQ0 251 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 BTN3A3O00478 584 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 IRF6O14896 467 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 FAM20BO75063 409 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 RGS20O76081 388 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 LDLRP01130 860 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ALOX5P09917 674 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 KIZQ2M2Z5 673 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 GALNT18Q6P9A2 607 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 RFWD3Q6PCD5 774 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 KRT35Q92764 455 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.374e-9■■■■■ 27.8
NEDD4L-208ENST00000456173 TUBGCP5Q96RT8 1024 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 TEX12Q9BXU0 123 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 SPRTNQ9H040 489 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 FAM32AQ9Y421 112 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 LOC100506127A0A0U1RQW1 187 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 TMEM247A6NEH6 219 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 EPHB6O15197 1021 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 NDUFB5O43674 189 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 MIER2Q8N344 545 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SUPT7LO94864 414 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SERPINE1P05121 402 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 GRB10Q13322 594 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 NCOA4Q13772 614 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 C6orf52Q5T4I8 152 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 TRIQKQ629K1 86 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SCAIQ8N9R8 606 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 FAM47BQ8NA70 645 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 DCUN1D1Q96GG9 259 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 ZNF333Q96JL9 665 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 WDR41Q9HAD4 459 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 FANCEQ9HB96 536 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 PLA2G4CQ9UP65 541 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SLC12A4Q9UP95 1085 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 C2orf71A6NGG8 1288 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 KRT6AP02538 564 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 C4BPBP20851 252 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 CHKAP35790 457 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 IST1P53990 364 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 UGP2Q16851 508 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 AAGABQ6PD74 315 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 CAMK1DQ8IU85 385 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 DQX1Q8TE96 717 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 RPS6KL1Q9Y6S9 549 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 E5RI56 91 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 LINGO3P0C6S8 592 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 RRM1P23921 792 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SEPHS1P49903 392 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 LRRC74AQ0VAA2 488 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 SURF1Q15526 300 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 CYP4A22Q5TCH4 519 aa12.73□□□□□ -0.37
NEDD4L-208ENST00000456173 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms