RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 TOX2Q96NM4 488 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 LRRC37BQ96QE4 947 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 CYTH2Q99418 400 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 DNAJC17Q9NVM6 304 aaKnown RBP11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 TBX21Q9UL17 535 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 AGAP1Q9UPQ3 857 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 CITO14578 2027 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
GTF3C2-206ENST00000454704 COL1A2P08123 1366 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 FAM170AA1A519 330 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 MOXD2PA6NHM9 499 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PI4K2BG5E9Z4 385 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CST8O60676 142 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 GH1P01241 217 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 ERBB2P04626 1255 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 DNAJB2P25686 324 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 FOXN2P32314 431 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 GRIN2CQ14957 1233 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 C2CD6Q53TS8 623 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CMPK2Q5EBM0 449 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 WASHC2DQ5SRD0 308 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 LGSNQ5TDP6 509 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 SEPT14Q6ZU15 432 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PHLDB2Q86SQ0 1253 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PALM2Q8IXS6 379 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 ACTL9Q8TC94 416 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 TEKT4Q8WW24 435 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CPT1BQ92523 772 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 RTP4Q96DX8 246 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 TBCBQ99426 244 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 MKS1Q9NXB0 559 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 PAK5Q9P286 719 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
GTF3C2-206ENST00000454704 DPYSL4O14531 572 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 KLF11O14901 512 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 DUSP11O75319 330 aaKnown RBP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 TIMP1P01033 207 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 EDN1P05305 212 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 TGM2P21980 687 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 CST5P28325 142 aaPredicted RBP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 TNFSF9P41273 254 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 PHKA2P46019 1235 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 ZNF143P52747 638 aaPredicted RBP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 NOMO1Q15155 1222 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 LLGL1Q15334 1064 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 ATP13A4Q4VNC1 1196 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 FAM91A1Q658Y4 838 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 XYLT1Q86Y38 959 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 MAB21L3Q8N8X9 362 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 RNF149Q8NC42 400 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 C10orf82Q8WW14 230 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 TIFAQ96CG3 184 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 HAUS1Q96CS2 278 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 RMDN2Q96LZ7 410 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 FGD4Q96M96 766 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 PAFAH2Q99487 392 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 GPR20Q99678 358 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 CNPY3Q9BT09 278 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 SYNCQ9H7C4 482 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 CYLDQ9NQC7 956 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 ZNF180Q9UJW8 692 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 IKBKGQ9Y6K9 419 aa11.02□□□□□ -0.64
GTF3C2-206ENST00000454704 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 NOP56O00567 594 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 TRDMT1O14717 391 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 LIN7AO14910 233 aaPredicted RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 KIF1CO43896 1103 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 CILPO75339 1184 aa11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 LUC7L3O95232 432 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 TRUB2O95900 331 aaKnown RBP11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 IFNB1P01574 187 aa11.01□□□□□ -0.65
GTF3C2-206ENST00000454704 ASGR1P07306 291 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms