RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 HEBP1Q9NRV9 189 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 CLIC5Q9NZA1 410 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 CHORDC1Q9UHD1 332 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-205ENST00000454542 CPQQ9Y646 472 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 A0A1W2PQH9 124 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 SMTNL1A8MU46 457 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 LEFTY2O00292 366 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 TPM2P07951 284 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 GLULP15104 373 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 GPD2P43304 727 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 TKTL1P51854 596 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 ADIGQ0VDE8 80 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-205ENST00000454542 TPRG1Q6ZUI0 275 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 DDX42Q86XP3 938 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDAC4-205ENST00000454542 SUGP1Q8IWZ8 645 aaKnown RBP14.91□□□□□ -0.02
HDAC4-205ENST00000454542 TMEM105Q8N8V8 129 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 UBA3Q8TBC4 463 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 OSCP1Q8WVF1 389 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 ZNF606Q8WXB4 792 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 CHFRQ96EP1 664 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 SHDQ96IW2 340 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 ZFYVE19Q96K21 471 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 HSFY1Q96LI6 401 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 ULBP1Q9BZM6 244 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
HDAC4-205ENST00000454542 KIAA1549LQ6ZVL6 1849 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 KANSL1LA0AUZ9 987 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 F8VZ95 297 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 FOXN3O00409 490 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
HDAC4-205ENST00000454542 EPHB6O15197 1021 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 MED7O43513 233 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 CAVIN2O95810 425 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-205ENST00000454542 CLCN1P35523 988 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 KLK7P49862 253 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 JAM2P57087 298 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 DRAP1Q14919 205 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PDGFRLQ15198 375 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 EML3Q32P44 896 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 FKBP15Q5T1M5 1219 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PMF1Q6P1K2 205 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PJA1Q8NG27 643 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 OSBPL6Q9BZF3 934 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 LTB4R2Q9NPC1 389 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 CNGB3Q9NQW8 809 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 THG1LQ9NWX6 298 aaKnown RBP14.9□□□□□ -0.02
HDAC4-205ENST00000454542 DLGAP2Q9P1A6 1054 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 PIAS3Q9Y6X2 628 aa14.9□□□□□ -0.02
HDAC4-205ENST00000454542 THAP12O43422 761 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 GREM1O60565 184 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 ZBED1O96006 694 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 ABL1P00519 1130 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 MBL2P11226 248 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-205ENST00000454542 RARGP13631 454 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 AVPR2P30518 371 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CTHP32929 405 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 NUBP1P53384 320 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 DAOAP59103 153 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 TNK2Q07912 1038 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 SYCP1Q15431 976 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 TRIM68Q6AZZ1 485 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 DENND1BQ6P3S1 775 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CCDC105Q8IYK2 499 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 ARHGAP18Q8N392 663 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CSGALNACT1Q8TDX6 532 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 STK32AQ8WU08 396 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 IRGQQ8WZA9 623 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CDK5RAP1Q96SZ6 601 aaKnown RBP14.89□□□□□ -0.03
HDAC4-205ENST00000454542 KLF16Q9BXK1 252 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-205ENST00000454542 SLC4A5Q9BY07 1137 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 STK33Q9BYT3 514 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 FOXQ1Q9C009 403 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 MFSD1Q9H3U5 465 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 C8orf33Q9H7E9 229 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-205ENST00000454542 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CBX8Q9HC52 389 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 GTSE1Q9NYZ3 720 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
HDAC4-205ENST00000454542 A0A1B0GTH6 734 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 E2F8A0AVK6 867 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 OTOL1A6NHN0 477 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 ARSAP15289 507 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 TARSP26639 723 aaKnown RBP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 CDH5P33151 784 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 RGS7P49802 495 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 YWHAGP61981 247 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 PTK2Q05397 1052 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 PDCLQ13371 301 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 RUNX3Q13761 415 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 RAPGEF1Q13905 1077 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 ITPRIPL2Q3MIP1 535 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 SLC47A2Q86VL8 602 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 RALGPS2Q86X27 583 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 SIX6OS1Q8N1H7 587 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 KCNH6Q9H252 994 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms