RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ARHGAP26Q9UNA1 814 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 COCHO43405 550 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 LCP1P13796 627 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 GPC5P78333 572 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 FCHO2Q0JRZ9 810 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 GRM2Q14416 872 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 NOP9Q86U38 636 aaKnown RBP29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 SIX6OS1Q8N1H7 587 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 ZNF276Q8N554 614 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 BAP1Q92560 729 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 TRMT61BQ9BVS5 477 aaKnown RBP29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 CLIC5Q9NZA1 410 aa29.42■■■□□ 2.3
SMARCC1-203ENST00000454240 TLR5O60602 858 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 TCF3P15923 654 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 ZXDBP98169 803 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 ARHGAP18Q8N392 663 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 BPIFB1Q8TDL5 484 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 NDRG1Q92597 394 aaKnown RBP29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 TTYH3Q9C0H2 523 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 NAGPAQ9UK23 515 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 MYO6Q9UM54 1294 aa29.41■■■□□ 2.3
SMARCC1-203ENST00000454240 ACADSBP45954 432 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 DAOAP59103 153 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 FIGNQ5HY92 759 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 TMEM110Q86TL2 294 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 ZNF677Q86XU0 584 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 PASD1Q8IV76 773 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 RIN3Q8TB24 985 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 EDEM3Q9BZQ6 932 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 XPO4Q9C0E2 1151 aaKnown RBP29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 NOCTQ9UK39 431 aaKnown RBP29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 CUL9Q8IWT3 2517 aa29.4■■■□□ 2.3
SMARCC1-203ENST00000454240 PIK3R2O00459 728 aa29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 RARGP13631 454 aa29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 CDH5P33151 784 aaPredicted RBP29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 YWHAGP61981 247 aaKnown RBP eCLIP29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 SIGLEC14Q08ET2 396 aa29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 PDCLQ13371 301 aa29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 ST7Q9NRC1 585 aa29.39■■■□□ 2.3
SMARCC1-203ENST00000454240 TECTAO75443 2155 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 FBXO21O94952 628 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 MBL2P11226 248 aaPredicted RBP29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 GDI1P31150 447 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 USP4Q13107 963 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 ZNF77Q15935 545 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 TAF3Q5VWG9 929 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 KLHDC10Q6PID8 442 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 TRIM67Q6ZTA4 783 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 IRGQQ8WZA9 623 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 NUP58Q9BVL2 599 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 CPQQ9Y646 472 aa29.38■■■□□ 2.29
SMARCC1-203ENST00000454240 YJEFN3A6XGL0 299 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 E7ENQ6 273 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 CHADO15335 359 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 TBX18O95935 607 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 MMEP08473 750 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 RALAP11233 206 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 ATP5C1P36542 298 aaKnown RBP29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 CDR2Q01850 454 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 SCUBE3Q8IX30 993 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 YAF2Q8IY57 180 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 C1orf131Q8NDD1 294 aaKnown RBP29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 SH3RF2Q8TEC5 729 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 SLC20A1Q8WUM9 679 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 ZFRQ96KR1 1074 aaKnown RBP29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 RBSNQ9H1K0 784 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 PDCL3Q9H2J4 239 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 BRD9Q9H8M2 597 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 WNT16Q9UBV4 365 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 CEP83Q9Y592 693 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 TICRRQ7Z2Z1 1910 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 COL4A2P08572 1712 aa29.37■■■□□ 2.29
SMARCC1-203ENST00000454240 E5RJQ4 531 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 LEFTY2O00292 366 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 ZNF263O14978 683 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 CBFA2T2O43439 604 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 TPM3P06753 285 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 CHRNB2P17787 502 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 ARHGAP29Q52LW3 1261 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 BSPRYQ5W0U4 402 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 GAS2L3Q86XJ1 694 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 TMEM35BQ8NCS4 154 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 CLEC4CQ8WTT0 213 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 IRF7Q92985 503 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 ASIC4Q96FT7 647 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 PPP1R13BQ96KQ4 1090 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 NOX5Q96PH1 765 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 CPXM1Q96SM3 734 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 CDK5RAP1Q96SZ6 601 aaKnown RBP29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 MIS12Q9H081 205 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 TRPV5Q9NQA5 729 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 THG1LQ9NWX6 298 aaKnown RBP29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 SMPD4Q9NXE4 827 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 NUDT5Q9UKK9 219 aa29.36■■■□□ 2.29
SMARCC1-203ENST00000454240 ARNTLO00327 626 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 FERP16591 822 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 FMO1Q01740 532 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 PFKPQ01813 784 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 ARID5AQ03989 594 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms