RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 SCAMP5Q8TAC9 235 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 KCNV2Q8TDN2 545 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 GMIPQ9P107 970 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 LSM7Q9UK45 103 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 SCML2Q9UQR0 700 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 RALGAPA1Q6GYQ0 2036 aa16.35■□□□□ 0.21
CTDSP1-205ENST00000452977 SLC30A4O14863 429 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 ATP5C1P36542 298 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 TNFRSF4P43489 277 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 PXNP49023 591 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 MXI1P50539 228 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 SLC8A3P57103 927 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 NUCB2P80303 420 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 SMOQ99835 787 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 MYH10P35580 1976 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
CTDSP1-205ENST00000452977 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 CILPO75339 1184 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 KAT7O95251 611 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 ZNF806P0C7X5 589 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 ADORA2BP29275 332 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 LIMK1P53667 647 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 BYSLQ13895 437 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 C2orf27AQ580R0 203 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 IL31Q6EBC2 164 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 KBTBD6Q86V97 674 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 C12orf29Q8N999 325 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 FBXL13Q8NEE6 735 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 ZMIZ2Q8NF64 920 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 ARRDC1-AS1Q9H2J1 176 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 VPS45Q9NRW7 570 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 DEC1Q9P2X7 70 aa16.33■□□□□ 0.2
CTDSP1-205ENST00000452977 A0A0A0MRY4 1105 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 K7EQS6 105 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 ZBTB24O43167 697 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 RALAP11233 206 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 PPP1R2P41236 205 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 SEC13P55735 322 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 YWHAEP62258 255 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 PPP3CAQ08209 521 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 STIM1Q13586 685 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 CRY1Q16526 586 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 GAB4Q2WGN9 574 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 PLK5Q496M5 336 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 LY6G5CQ5SRR4 150 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 CLEC20AQ6ZU45 233 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 GOLPH3LQ9H4A5 285 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 SPHK2Q9NRA0 654 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 RAB20Q9NX57 234 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 HMGXB4Q9UGU5 601 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
CTDSP1-205ENST00000452977 MED19A0JLT2 244 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 TBC1D3BA6NDS4 549 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 CD58P19256 250 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 GBP1P32455 592 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 MPLP40238 635 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 FKBP3Q00688 224 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 LRRC63Q05C16 580 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 ORC1Q13415 861 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 ANO4Q32M45 955 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 HTR3DQ70Z44 454 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 RASSF3Q86WH2 238 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 WHAMMQ8TF30 809 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 DUSP16Q9BY84 665 aa16.31■□□□□ 0.2
CTDSP1-205ENST00000452977 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms