RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 THP07101 528 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CD63P08962 238 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 FGF2P09038 288 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 FGF3P11487 239 aaPredicted RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PDCP20941 246 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 EPHA3P29320 983 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ALDH7A1P49419 539 aaKnown RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 BCAT1P54687 386 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CFHR3Q02985 330 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ITKQ08881 620 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 STIM1Q13586 685 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 MTMR1Q13613 665 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CCNIQ14094 377 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 MFSD13AQ14CX5 517 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 INPP5JQ15735 1006 aaPredicted RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PTPN21Q16825 1174 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PGS1Q32NB8 556 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PLA1AQ53H76 456 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 DCAF12L1Q5VU92 463 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 LMBRD2Q68DH5 695 aaPredicted RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 USP45Q70EL2 814 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CUZD1Q86UP6 607 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 NR2C2APQ86WQ0 139 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 SPARTQ8N0X7 666 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 FBXL14Q8N1E6 418 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PRR18Q8N4B5 295 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CELF5Q8N6W0 485 aaKnown RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 DNAJC5GQ8N7S2 189 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 NGDNQ8NEJ9 315 aaKnown RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 WIPF2Q8TF74 440 aaPredicted RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ASB5Q8WWX0 329 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 DNASE2BQ8WZ79 361 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CDK5RAP3Q96JB5 506 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 LMLNQ96KR4 655 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 VN1R3Q9BXE9 311 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ARHGAP39Q9C0H5 1083 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 TRIM36Q9NQ86 728 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 DECR2Q9NUI1 292 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 TMEM45AQ9NWC5 275 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ZSCAN32Q9NX65 697 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 PCDHA6Q9UN73 950 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 USP22Q9UPT9 525 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 TTBK1Q5TCY1 1321 aaPredicted RBP1.34□□□□□ -2.2
SNHG3-203ENST00000447507 C2CD4BA6NLJ0 364 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 F8W810 466 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 CLIC1O00299 241 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SPTLC2O15270 562 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 LINC01565O15544 149 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 AKAP10O43572 662 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SPRY2O43597 315 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TLX3O43711 291 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ZC3H11AO75152 810 aaKnown RBP eCLIP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 USP12O75317 370 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 NDUFB8O95169 186 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 EPN2O95208 641 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 CREB1P16220 341 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ATF7P17544 494 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TBXAS1P24557 533 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TNFRSF8P28908 595 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 PRKAR1BP31321 381 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 RECQLP46063 649 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 GUCY2FP51841 1108 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 GAS1P54826 345 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 P2RX3P56373 397 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 PPATQ06203 517 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SLC14A1Q13336 389 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 KPNB1Q14974 876 aaKnown RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ODF1Q14990 250 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 PFKFB3Q16875 520 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF783Q6ZMS7 281 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 FAM57BQ71RH2 274 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 COL23A1Q86Y22 540 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SPATA2LQ8IUW3 424 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SLC15A4Q8N697 577 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 DNAJB14Q8TBM8 379 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TMEM255BQ8WV15 326 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 JPH3Q8WXH2 748 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 PPP2R3CQ969Q6 453 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 MIB2Q96AX9 1013 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 CTHRC1Q96CG8 243 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TRMT61AQ96FX7 289 aaKnown RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 WDYHV1Q96HA8 205 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 MED30Q96HR3 178 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TUBB6Q9BUF5 446 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 SCNM1Q9BWG6 230 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 MS4A7Q9GZW8 240 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 MYLK2Q9H1R3 596 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 GBA2Q9HCG7 927 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ARL8BQ9NVJ2 186 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 MGAT4CQ9UBM8 478 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 CPA4Q9UI42 421 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ERRFI1Q9UJM3 462 aaPredicted RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 STXBP5LQ9Y2K9 1186 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 ATP8A1Q9Y2Q0 1164 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 CDY1Q9Y6F8 540 aa1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TCF20Q9UGU0 1960 aaKnown RBP1.33□□□□□ -2.2
SNHG3-203ENST00000447507 TMEM272A0A1B0GTI8 110 aa1.32□□□□□ -2.2
SNHG3-203ENST00000447507 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.32□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF814B7Z6K7 855 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms