RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TAZQ16635 292 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 C6orf118Q5T5N4 469 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 UNC45BQ8IWX7 931 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 HSFY1Q96LI6 401 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 RNF157Q96PX1 679 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 RBM15Q96T37 977 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 HNRNPABQ99729 332 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 SNRNP25Q9BV90 132 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 DHX35Q9H5Z1 703 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 MYBPHLA2RUH7 354 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 H7C0C1 242 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 GABRDO14764 452 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 TRIM66O15016 1216 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 SHOX2O60902 331 aaPredicted RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 NPR3P17342 541 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ATP5OP48047 213 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 NRLP54845 237 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 IFI35P80217 286 aaPredicted RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 TFDP2Q14188 446 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 TIGD5Q53EQ6 642 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 DCAF6Q58WW2 860 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ANKRD20A8PQ5CZ79 823 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ERMARDQ5T6L9 678 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 PAQR9Q6ZVX9 377 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 SLC26A9Q7LBE3 791 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 DEFB106AQ8N104 65 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 SIX6OS1Q8N1H7 587 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ARFGAP2Q8N6H7 521 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 GLT1D1Q96MS3 346 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ADAM33Q9BZ11 813 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 TRPV6Q9H1D0 765 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 PCDH9Q9HC56 1237 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 SAYSD1Q9NPB0 183 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 CRTAC1Q9NQ79 661 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 KRT82Q9NSB4 513 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 NINJ2Q9NZG7 142 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 A0A0U1RQF3 1178 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 EIF3HO15372 352 aaKnown RBP eCLIP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 RPLP2P05387 115 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 FAM200BP0CF97 657 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 IL4RP24394 825 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 MDH1P40925 334 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 MAGEA4P43358 317 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 LHX1P48742 406 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 TKTL1P51854 596 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PPP2R2AP63151 447 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PTK7Q13308 1070 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 MTM1Q13496 603 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PDK2Q15119 407 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 UPP1Q16831 310 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CCDC38Q502W7 563 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 SYCP2LQ5T4T6 812 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CLEC20AQ6ZU45 233 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 ZCCHC9Q8N567 271 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CCDC33Q8N5R6 958 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 BCAS4Q8TDM0 211 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 TBCBQ99426 244 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 SELENOSQ9BQE4 189 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 SYT15Q9BQS2 421 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 FRMD8P1Q9BZ68 369 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PCDH18Q9HCL0 1135 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 APOL1O14791 398 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 AP1G2O75843 785 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 ENDOD1O94919 500 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CST5P28325 142 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 RPL9P32969 192 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 RPL22P35268 128 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 BRCC3P46736 316 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 SULT1E1P49888 294 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 BCAR1P56945 870 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 BASP1P80723 227 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 MRPS5P82675 430 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 ROR1Q01973 937 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 FOXR1Q6PIV2 292 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 MRPL10Q7Z7H8 261 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 FAM131BQ86XD5 332 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 C10orf67Q8IYJ2 551 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 TMEM86AQ8N2M4 240 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 CCDC185Q8N715 623 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PLD5Q8N7P1 536 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PGBD4Q96DM1 585 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PCED1BQ96HM7 432 aa9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 PPANQ9NQ55 473 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-201ENST00000446690 A6NNZ2 444 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 TOMM70O94826 608 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 YY1P25490 414 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 LSP1P33241 339 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 MATKP42679 507 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 PTPN9P43378 593 aa9.92□□□□□ -0.82
COL6A4P1-201ENST00000446690 RPL34P49207 117 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms