RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MMP8	P22894	467 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	BPIFB4	P59827	614 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SAPCD2	Q86UD0	394 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM160B2	Q86V87	743 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	NUDCD3	Q8IVD9	361 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	PRPF31	Q8WWY3	499 aa	Known RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	HEXIM2	Q96MH2	286 aa	Known RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	EURL	Q9NYK6	297 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SCOC	Q9UIL1	159 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SLC4A7	Q9Y6M7	1214 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SCIN	Q9Y6U3	715 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	GOLGA8Q	A0A0J9YX86	632 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	GOLGA8O	A6NCC3	632 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	GOLGA8N	F8WBI6	632 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	NEMP1	O14524	444 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	MCF2L	O15068	1137 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	ASNS	P08243	561 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	RBL1	P28749	1068 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	PHB	P35232	272 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	VHL	P40337	213 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	HSD17B4	P51659	736 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	RABGGTB	P53611	331 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	MRPS35	P82673	323 aa	Known RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	PTP4A2	Q12974	167 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	KRT81	Q14533	505 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	MAP7D1	Q3KQU3	841 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	RIPOR1	Q6ZS17	1223 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	PPIL6	Q8IXY8	311 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SH3TC2	Q8TF17	1288 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	DCAKD	Q8WVC6	231 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM151A	Q8WW52	585 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	SLC7A3	Q8WY07	619 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	ATP6V0A1	Q93050	837 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	DCLRE1B	Q9H816	532 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	AVEN	Q9NQS1	362 aa	Predicted RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	UBAP1	Q9NZ09	502 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	HERC5	Q9UII4	1024 aa	Known RBP	13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	INPP5F	Q9Y2H2	1132 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	FIS1	Q9Y3D6	152 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	MFHAS1	Q9Y4C4	1052 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312		A0A0B4J269	797 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312		I3L4J1	428 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	E2F6	O75461	281 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	PGM3	O95394	542 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	CXCL8	P10145	99 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	NELFE	P18615	380 aa	Known RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	MORF4L2	Q15014	288 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	OASL	Q15646	514 aa	Known RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	FOXB2	Q5VYV0	432 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	C16orf87	Q6PH81	154 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	TMC2	Q8TDI7	906 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNF333	Q96JL9	665 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	KCNK13	Q9HB14	408 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	CFLAR	O15519	480 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	USP12	O75317	370 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	TCN1	P20061	433 aa	Predicted RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	PTGER2	P43116	358 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	KRT76	Q01546	638 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	PPM1J	Q5JR12	505 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	GJC2	Q5T442	439 aa	Predicted RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	MCF2L2	Q86YR7	1114 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	SMC1B	Q8NDV3	1235 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	NDRG1	Q92597	394 aa	Known RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	AGAP3	Q96P47	875 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	TUBGCP5	Q96RT8	1024 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	B3GNT5	Q9BYG0	378 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	C2CD2L	O14523	706 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ITM2A	O43736	263 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ERBB2	P04626	1255 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	PSAP	P07602	524 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	ADORA2A	P29274	412 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	SOX11	P35716	441 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	DPYSL3	Q14195	570 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	CTC1	Q2NKJ3	1217 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	EEF1DP3	Q658K8	133 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	NANOGNB	Q7Z5D8	188 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	BANP	Q8N9N5	519 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	SMYD2	Q9NRG4	433 aa		13.03	□□□□□ -0.32
DDR1-238	ENST00000446312	WNT10B	O00744	389 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	HMGCR	P04035	888 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	TFE3	P19532	575 aa	Predicted RBP	13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	KDELR1	P24390	212 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	JAK3	P52333	1124 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	CA9	Q16790	459 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	GRAMD1B	Q3KR37	738 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	SLC45A4	Q5BKX6	768 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	RAPH1	Q70E73	1250 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	LCA5	Q86VQ0	697 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	SLCO2A1	Q92959	643 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	NMD3	Q96D46	503 aa	Known RBP	13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	TRIM11	Q96F44	468 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	MARK4	Q96L34	752 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	TTC25	Q96NG3	672 aa		13.02	□□□□□ -0.32
DDR1-238	ENST00000446312	NACA2	Q9H009	215 aa		13.02	□□□□□ -0.32

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