RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 CPA6Q8N4T0 437 aa19.79■□□□□ 0.76
HDAC4-203ENST00000445704 UBA3Q8TBC4 463 aa19.79■□□□□ 0.76
HDAC4-203ENST00000445704 ATP2A3Q93084 1043 aa19.79■□□□□ 0.76
HDAC4-203ENST00000445704 UBXN6Q9BZV1 441 aa19.79■□□□□ 0.76
HDAC4-203ENST00000445704 CYLDQ9NQC7 956 aa19.79■□□□□ 0.76
HDAC4-203ENST00000445704 SAMSN1Q9NSI8 373 aaKnown RBP19.79■□□□□ 0.76
HDAC4-203ENST00000445704 XPO1O14980 1071 aaKnown RBP19.78■□□□□ 0.76
HDAC4-203ENST00000445704 BRD2P25440 801 aaKnown RBP19.78■□□□□ 0.76
HDAC4-203ENST00000445704 BST2Q10589 180 aaKnown RBP19.78■□□□□ 0.76
HDAC4-203ENST00000445704 GAS6Q14393 721 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 MAN2A1Q16706 1144 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 PKDCCQ504Y2 493 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 Q6ZS52 159 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 UBE2TQ9NPD8 197 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-203ENST00000445704 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC4-203ENST00000445704 HESX1Q9UBX0 185 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 NUDT5Q9UKK9 219 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 KIAA1257Q9ULG3 409 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 CNTN6Q9UQ52 1028 aa19.78■□□□□ 0.76
HDAC4-203ENST00000445704 MDM4O15151 490 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 LAMTOR5O43504 91 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 SP9P0CG40 484 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 RARGP13631 454 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 CCINQ13939 588 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 MIIPQ5JXC2 388 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 LCLAT1Q6UWP7 414 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 GBP6Q6ZN66 633 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 DDX42Q86XP3 938 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC4-203ENST00000445704 FAM114A1Q8IWE2 563 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 FBRSL1Q9HCM7 1045 aaKnown RBP19.77■□□□□ 0.76
HDAC4-203ENST00000445704 NAGPAQ9UK23 515 aa19.77■□□□□ 0.76
HDAC4-203ENST00000445704 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC4-203ENST00000445704 GTPBP10A4D1E9 387 aaKnown RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 TRDMT1O14717 391 aaKnown RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 NFATC1O95644 943 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 MBD3O95983 291 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 CYP17A1P05093 508 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 IRF1P10914 325 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 NBL1P41271 181 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 PLA2G4AP47712 749 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 TKTL1P51854 596 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 LRRC32Q14392 662 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 GAB4Q2WGN9 574 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 TMEM196Q5HYL7 178 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 CT47A1Q5JQC4 288 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 C11orf57Q6ZUT1 292 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 BHLHA9Q7RTU4 235 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 KIAA1958Q8N8K9 716 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 NDRG1Q92597 394 aaKnown RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 TUBGCP2Q9BSJ2 902 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 KLF16Q9BXK1 252 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 ULBP1Q9BZM6 244 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 NACA2Q9H009 215 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 SIX2Q9NPC8 291 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 PRMT8Q9NR22 394 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 AJAP1Q9UKB5 411 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-203ENST00000445704 NFE2L3Q9Y4A8 694 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 CACNA1IQ9P0X4 2223 aa19.76■□□□□ 0.75
HDAC4-203ENST00000445704 E2F8A0AVK6 867 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 KCNJ18B7U540 433 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 GABBR2O75899 941 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 SETSIPP0DME0 302 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 KRT5P13647 590 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 PON1P27169 355 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 HOXD11P31277 338 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-203ENST00000445704 ATP5C1P36542 298 aaKnown RBP19.75■□□□□ 0.75
HDAC4-203ENST00000445704 GALK1P51570 392 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 SLC8A3P57103 927 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 KCNJ12Q14500 433 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 CNGA2Q16280 664 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 EXOC3L4Q17RC7 722 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 DGKKQ5KSL6 1271 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 TSSK4Q6SA08 328 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 ALYREFQ86V81 257 aaKnown RBP19.75■□□□□ 0.75
HDAC4-203ENST00000445704 ADGRG2Q8IZP9 1017 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 SECISBP2LQ93073 1101 aaKnown RBP19.75■□□□□ 0.75
HDAC4-203ENST00000445704 NDST4Q9H3R1 872 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 APEX2Q9UBZ4 518 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 SH3BP1Q9Y3L3 701 aa19.75■□□□□ 0.75
HDAC4-203ENST00000445704 BECN2A8MW95 431 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 M0QYV0 167 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 GREM1O60565 184 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 EGFP01133 1207 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 PRKCSHP14314 528 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-203ENST00000445704 PSEN1P49768 467 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 MRE11P49959 708 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 MFAP3P55082 362 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 CSTF1Q05048 431 aaKnown RBP19.74■□□□□ 0.75
HDAC4-203ENST00000445704 ADIGQ0VDE8 80 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 DHCR24Q15392 516 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 VWA3BQ502W6 1294 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 C10orf120Q5SQS8 335 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 CCDC183Q5T5S1 534 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 PM20D1Q6GTS8 502 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 KLHDC10Q6PID8 442 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 BBS7Q8IWZ6 715 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 ENOX1Q8TC92 643 aaKnown RBP19.74■□□□□ 0.75
HDAC4-203ENST00000445704 SLC35F5Q8WV83 523 aa19.74■□□□□ 0.75
HDAC4-203ENST00000445704 EZH1Q92800 747 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms