RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CLEC9AQ6UXN8 241 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 ENAHQ8N8S7 591 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZNF527Q8NB42 609 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 MUL1Q969V5 352 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 PRR25Q96S07 402 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 TMEM8AQ9HCN3 771 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 DUSP22Q9NRW4 184 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 ST3GAL5Q9UNP4 418 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 DTNAQ9Y4J8 743 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 H0YIZ8 118 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 PIP5K1BO14986 540 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 NPC1O15118 1278 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 DHHO43323 396 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 SPRY2O43597 315 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 CBFA2T3O75081 653 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 PMPCBO75439 489 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 TJP3O95049 919 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 IDEP14735 1019 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 GKP32189 559 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 CYP2C18P33260 490 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 PDE1AP54750 535 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 ERCC6LQ2NKX8 1250 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 PLAC9Q5JTB6 97 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 ERAP2Q6P179 960 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 OLFML1Q6UWY5 402 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 Q6ZWC4 215 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 PARS2Q7L3T8 475 aaKnown RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 MYLK4Q86YV6 388 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 MBD3L2Q8NHZ7 208 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 RP9Q8TA86 221 aaKnown RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 WDYHV1Q96HA8 205 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 LENG8Q96PV6 779 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 IKZF4Q9H2S9 585 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 SYNPO2LQ9H987 977 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 OBP2BQ9NPH6 170 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 TMOD4Q9NZQ9 345 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 MAGED2Q9UNF1 606 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 DMRT1Q9Y5R6 373 aa5.33□□□□□ -1.56
HMGB3P6-201ENST00000444896 AQP12BA6NM10 295 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 LGALS16A8MUM7 142 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 IFRD1O00458 451 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 TPD52L2O43399 206 aaKnown RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 CCNT2O60583 730 aaKnown RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 TTLL1O95922 423 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 ENGP17813 658 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 CXCR5P32302 372 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 TRAPPC10P48553 1259 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 E2F1Q01094 437 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 GPS1Q13098 491 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 MTAPQ13126 283 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 ATP1A4Q13733 1029 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 PTK2BQ14289 1009 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 SPARCL1Q14515 664 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 CLCA4Q14CN2 919 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 ACOX1Q15067 660 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 PFKFB4Q16877 469 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 PRR16Q569H4 304 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZNF362Q5T0B9 420 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 ANKRD16Q6P6B7 361 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 WDR53Q7Z5U6 358 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 RAB11FIP4Q86YS3 637 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 LRRC71Q8N4P6 559 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 STYXQ8WUJ0 223 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 WDR24Q96S15 920 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 THAP7Q9BT49 309 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 DPCDQ9BVM2 203 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 TRIM36Q9NQ86 728 aa5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
HMGB3P6-201ENST00000444896 COL11A2P13942 1736 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 AP4M1O00189 453 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZNF213O14771 459 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 SNX2O60749 519 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 PPFIA2O75334 1257 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 PRKCBP05771 671 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 FAM163BP0C2L3 166 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 EBLN1P0CF75 366 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 RBL1P28749 1068 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 MCM5P33992 734 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 TPTEP56180 551 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 PSG6Q00889 435 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 NSUN2Q08J23 767 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 TRIM14Q14142 442 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZACNQ401N2 412 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ARL6IP4Q66PJ3 421 aaKnown RBP5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 CCDC174Q6PII3 467 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ABHD5Q8WTS1 349 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 FSD1LQ9BXM9 530 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 IL17RBQ9NRM6 502 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 LPAR3Q9UBY5 353 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 NKX1-2Q9UD57 310 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 STEAP1Q9UHE8 339 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ASAP1Q9ULH1 1129 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 ENTPD2Q9Y5L3 495 aa5.31□□□□□ -1.56
HMGB3P6-201ENST00000444896 KAT6AQ92794 2004 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms