RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SNX32Q86XE0 403 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERC1-201ENST00000443617 PDZD8Q8NEN9 1154 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CALML6Q8TD86 181 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 KAT5Q92993 513 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 NKD2Q969F2 451 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 TAMM41Q96BW9 452 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 COPG2Q9UBF2 871 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 PRRC2BQ5JSZ5 2229 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 ZMPSTE24O75844 475 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 KRT7P08729 469 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SSTR1P30872 391 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BTDP43251 543 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB9P50453 376 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 OGFRL1Q5TC84 451 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 TRMT1LQ7Z2T5 733 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 ACP6Q9NPH0 428 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TBX3O15119 743 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 GPX6P59796 221 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 OXCT2Q9BYC2 517 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 FRMD8Q9BZ67 464 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 CCPG1Q9ULG6 757 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 NR2E3Q9Y5X4 410 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 MGEA5O60502 916 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 PDK1Q15118 436 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 FNBP1LQ5T0N5 605 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 JMJD4Q9H9V9 463 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 GOLGA8QA0A0J9YX86 632 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 GOLGA8OA6NCC3 632 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 GOLGA8NF8WBI6 632 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 EML1O00423 815 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZBTB39O15060 712 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ELK3P41970 407 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 C1QBPQ07021 282 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZYXQ15942 572 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 QRICH1Q2TAL8 776 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 GALNT18Q6P9A2 607 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PLA2G4CQ9UP65 541 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SLC16A4O15374 487 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SLC18A2Q05940 514 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 HPS6Q86YV9 775 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SENP7Q9BQF6 1050 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DHRS4Q9BTZ2 278 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SLAIN2Q9P270 581 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 RGSL1A5PLK6 1076 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PSMD12O00232 456 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 TNNI1P19237 187 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB5P36952 375 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ATXN3P54252 364 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 MRPS22P82650 360 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 SNAPC2Q13487 334 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ANKRD22Q5VYY1 191 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TMEM126BQ8IUX1 230 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ARHGEF19Q8IW93 802 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 KIAA2013Q8IYS2 634 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SIX5Q8N196 739 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 STN1Q9H668 368 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 IL10P22301 178 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 FMO1Q01740 532 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 HM13Q8TCT9 377 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PI4K2AQ9BTU6 479 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 AMNQ9BXJ7 453 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ILKAPQ9H0C8 392 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 GNPTGQ9UJJ9 305 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZBTB21Q9ULJ3 1066 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PHGDHO43175 533 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 SMIM18P0DKX4 95 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 IDH3AP50213 366 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SNRPFP62306 86 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 SF3B3Q15393 1217 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZNF568Q3ZCX4 644 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 NLRX1Q86UT6 975 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SPATA18Q8TC71 538 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PLEKHA8Q96JA3 519 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 CSRNP1Q96S65 589 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZNF229Q9UJW7 825 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ERVK-11Q9UQG0 969 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 NELFEP18615 380 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZNF829Q3KNS6 432 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 ACTL9Q8TC94 416 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 POMGNT1Q8WZA1 660 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 POLIQ9UNA4 740 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZBTB1Q9Y2K1 713 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TKTP29401 623 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 CRHR1P34998 444 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 NUDT2P50583 147 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DNAJC28Q9NX36 388 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SLC9A2Q9UBY0 812 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DCDC2Q9UHG0 476 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB13Q9UIV8 391 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 NOTOA8MTQ0 251 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PFDN6O15212 129 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 GSNP06396 782 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ARPC4P59998 168 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PPP4CP60510 307 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TUBA4AP68366 448 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PBXIP1Q96AQ6 731 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PRM3Q9NNZ6 103 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms