RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 RFX1P22670 979 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 USP8P40818 1118 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TUBP50607 506 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 DAOAP59103 153 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TNK2Q07912 1038 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 GAB4Q2WGN9 574 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 PASD1Q8IV76 773 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SCML4Q8N228 414 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SH3RF2Q8TEC5 729 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TSPY26PQ9H489 355 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TDP1Q9NUW8 608 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SMPD4Q9NXE4 827 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 CPQQ9Y646 472 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TRAV19A0A0A6YYK7 116 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 LEFTY2O00292 366 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 TLR5O60602 858 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 GFPT2O94808 682 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 ZBED1O96006 694 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 MMEP08473 750 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 ALADP13716 330 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 ARSAP15289 507 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 PSMC3P17980 439 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 HDCP19113 662 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 GDI1P31150 447 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 CDH5P33151 784 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 PPP3CCP48454 512 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 STILQ15468 1287 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 C1orf131Q8NDD1 294 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 BPIFB1Q8TDL5 484 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 KLF16Q9BXK1 252 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 FBXO44Q9H4M3 255 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 GKN1Q9NS71 199 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 HESX1Q9UBX0 185 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 CA14Q9ULX7 337 aa13.51□□□□□ -0.25
PDLIM2-212ENST00000443561 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 E5RJQ4 531 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 GPR37L1O60883 481 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 ABL1P00519 1130 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 ERBB2P04626 1255 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 CKMP06732 381 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 RARGP13631 454 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 LCP1P13796 627 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 PFKLP17858 780 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 SOX5P35711 763 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 AVPR1AP37288 418 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 SOX9P48436 509 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 FMO1Q01740 532 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 PDCLQ13371 301 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 MTF1Q14872 753 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 HECTD3Q5T447 861 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 TAF3Q5VWG9 929 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 TXNDC11Q6PKC3 985 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 PCDHB18PQ96TA0 734 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 DDX23Q9BUQ8 820 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 TRMT61BQ9BVS5 477 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 LINC00597Q9H2U6 94 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 GTSE1Q9NYZ3 720 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 IFNKQ9P0W0 207 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 ZMYM5Q9UJ78 669 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 WNT6Q9Y6F9 365 aa13.5□□□□□ -0.25
PDLIM2-212ENST00000443561 CHADO15335 359 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 CAVIN2O95810 425 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 MBL2P11226 248 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 TRIM21P19474 475 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 VCPP55072 806 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 YWHAGP61981 247 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 NOMO3P69849 1222 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 FZD5Q13467 585 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 TAF5Q15542 800 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 EML3Q32P44 896 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 BMP8AQ7Z5Y6 402 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 TMEM110Q86TL2 294 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 SIX5Q8N196 739 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 NEK11Q8NG66 645 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 STK32AQ8WU08 396 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 HSFY1Q96LI6 401 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms