RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 CPLX3Q8WVH0 158 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 PCDHB18PQ96TA0 734 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 SYT11Q9BT88 431 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 MIS12Q9H081 205 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 ZFP14Q9HCL3 533 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 TLR8Q9NR97 1041 aaKnown RBP16.85■□□□□ 0.29
USP39-205ENST00000442708 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 IGSF9Q9P2J2 1179 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 NUDT5Q9UKK9 219 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 CAPN11Q9UMQ6 739 aa16.85■□□□□ 0.29
USP39-205ENST00000442708 TRAV19A0A0A6YYK7 116 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 A0A1W2PQJ5 194 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 SOBPA7XYQ1 873 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 HEPACAM2A8MVW5 462 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 E7ENQ6 273 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 TNFRSF10AO00220 468 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 NARSO43776 548 aaKnown RBP16.84■□□□□ 0.29
USP39-205ENST00000442708 ECI2O75521 394 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 HDCP19113 662 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 CDH5P33151 784 aaPredicted RBP16.84■□□□□ 0.29
USP39-205ENST00000442708 DAOAP59103 153 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 PTPN20Q4JDL3 420 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 TMEM110Q86TL2 294 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 SCML4Q8N228 414 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 ELSPBP1Q96BH3 223 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 CNGB3Q9NQW8 809 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 TDP1Q9NUW8 608 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.84■□□□□ 0.29
USP39-205ENST00000442708 AIPL1Q9NZN9 384 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 NAGPAQ9UK23 515 aa16.84■□□□□ 0.29
USP39-205ENST00000442708 MDM4O15151 490 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 PAPSS1O43252 624 aaPredicted RBP16.83■□□□□ 0.28
USP39-205ENST00000442708 ERBB2P04626 1255 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 CYP1A1P04798 512 aaPredicted RBP16.83■□□□□ 0.28
USP39-205ENST00000442708 TPM3P06753 285 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 COL4A2P08572 1712 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 RARGP13631 454 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 FERP16591 822 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 AVPR1AP37288 418 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 TUBP50607 506 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 YWHAGP61981 247 aaKnown RBP eCLIP16.83■□□□□ 0.28
USP39-205ENST00000442708 NOMO3P69849 1222 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 TDGQ13569 410 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 GRM2Q14416 872 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 SFMBT2Q5VUG0 894 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 NAA35Q5VZE5 725 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 ZNF677Q86XU0 584 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 TMEM35BQ8NCS4 154 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 CPA5Q8WXQ8 436 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 NXPE3Q969Y0 559 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 PIWIL1Q96J94 861 aaKnown RBP16.83■□□□□ 0.28
USP39-205ENST00000442708 PPP1R13BQ96KQ4 1090 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 ZFRQ96KR1 1074 aaKnown RBP16.83■□□□□ 0.28
USP39-205ENST00000442708 AGPAT1Q99943 283 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 TRIM5Q9C035 493 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 CYLDQ9NQC7 956 aa16.83■□□□□ 0.28
USP39-205ENST00000442708 TLR5O60602 858 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 FYNP06241 537 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 CKMP06732 381 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 SKILP12757 684 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 CASP14P31944 242 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ACADSBP45954 432 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ZNF75DP51815 510 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 SLC7A9P82251 487 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ZBED6P86452 979 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 GOLGA8FQ08AF8 430 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 GOLGA8DPQ0D2H9 430 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ASIC2Q16515 512 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 C2CD6Q53TS8 623 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 WBP2Q969T9 261 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ANP32EQ9BTT0 268 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 PDCL3Q9H2J4 239 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 CLIC5Q9NZA1 410 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ZMYM5Q9UJ78 669 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 ARHGAP26Q9UNA1 814 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 SORCS3Q9UPU3 1222 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 CPQQ9Y646 472 aa16.82■□□□□ 0.28
USP39-205ENST00000442708 COL4A3Q01955 1670 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 TICRRQ7Z2Z1 1910 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 FBXO21O94952 628 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 UNGP13051 313 aaPredicted RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 PFKLP17858 780 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 PRKCIP41743 596 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 GPC5P78333 572 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 USP4Q13107 963 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 ZNF268Q14587 947 aaPredicted RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 TAF5Q15542 800 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 ZNF77Q15935 545 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms