RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 PGFP49763 221 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 MXI1P50539 228 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 FKBP3Q00688 224 aaKnown RBP17.51■□□□□ 0.39
IRF3-204ENST00000442265 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 PRR23BQ6ZRT6 265 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 USP33Q8TEY7 942 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 EEF2KMTQ96G04 330 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 LOXL4Q96JB6 756 aa17.51■□□□□ 0.39
IRF3-204ENST00000442265 TLR8Q9NR97 1041 aaKnown RBP17.51■□□□□ 0.39
IRF3-204ENST00000442265 HOOK1Q9UJC3 728 aaKnown RBP17.51■□□□□ 0.39
IRF3-204ENST00000442265 GREM1O60565 184 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 TLR5O60602 858 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 ADH1CP00326 375 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 ADORA2BP29275 332 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 KIF11P52732 1056 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 LPAL2Q16609 132 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 KLHDC10Q6PID8 442 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 HTR3DQ70Z44 454 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 GPRIN1Q7Z2K8 1008 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 ZC3H10Q96K80 434 aaKnown RBP17.5■□□□□ 0.39
IRF3-204ENST00000442265 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 UBXN6Q9BZV1 441 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■■■■■ 61.3
IRF3-204ENST00000442265 USP3Q9Y6I4 520 aa17.5■□□□□ 0.39
IRF3-204ENST00000442265 HOXC11O43248 304 aaPredicted RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 FOXD2O60548 495 aaPredicted RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 APBB3O95704 486 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 CD58P19256 250 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 DMC1Q14565 340 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 FOXR2Q6PJQ5 311 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 FAM160A2Q8N612 972 aaPredicted RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 SLC4A11Q8NBS3 891 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 PNKPQ96T60 521 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 TSG101Q99816 390 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 KLF16Q9BXK1 252 aaPredicted RBP17.49■□□□□ 0.39
IRF3-204ENST00000442265 MMRN2Q9H8L6 949 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
IRF3-204ENST00000442265 AXIN1O15169 862 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 ADH5P11766 374 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 ACO1P21399 889 aaKnown RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 PXNP49023 591 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 PSEN1P49768 467 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 RAD23BP54727 409 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 MRPS21P82921 87 aaKnown RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 GAD2Q05329 585 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 SPEM2Q0P670 501 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 MESP2Q0VG99 397 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CSRP2Q16527 193 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 RSPO4Q2I0M5 234 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 HSF5Q4G112 596 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 CBWD6Q4V339 395 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CBWD3Q5JTY5 395 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CBWD5Q5RIA9 395 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 LY6G5CQ5SRR4 150 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 ARHGAP17Q68EM7 881 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CEP68Q76N32 757 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 CACNA2D4Q7Z3S7 1137 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 ETFBKMTQ8IXQ9 262 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 PHTF2Q8N3S3 785 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 SLC35C1Q96A29 364 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
IRF3-204ENST00000442265 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 ARMCX3Q9UH62 379 aaPredicted RBP17.48■□□□□ 0.39
IRF3-204ENST00000442265 MMP17Q9ULZ9 603 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 USP18Q9UMW8 372 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 SH3BP1Q9Y3L3 701 aa17.48■□□□□ 0.39
IRF3-204ENST00000442265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
IRF3-204ENST00000442265 SCAMP3O14828 347 aaKnown RBP17.47■□□□□ 0.39
IRF3-204ENST00000442265 PMM2O15305 246 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 CYP26A1O43174 497 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 KAT7O95251 611 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 TBX18O95935 607 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 ATP5C1P36542 298 aaKnown RBP17.47■□□□□ 0.39
IRF3-204ENST00000442265 PPP1R2P41236 205 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 GRIA2P42262 883 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 TNFRSF4P43489 277 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 SLC6A11P48066 632 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 DGLUCYQ7Z3D6 616 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 RASSF3Q86WH2 238 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 C12orf40Q86WS4 652 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 BBS7Q8IWZ6 715 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 KCNV2Q8TDN2 545 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 TATDN2Q93075 761 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 WBP2Q969T9 261 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 TMEM176AQ96HP8 235 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 DHTKD1Q96HY7 919 aaPredicted RBP17.47■□□□□ 0.39
IRF3-204ENST00000442265 HHIPQ96QV1 700 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 ARID3AQ99856 593 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 NMUR1Q9HB89 426 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 SPHK2Q9NRA0 654 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 SEMA4GQ9NTN9 838 aa17.47■□□□□ 0.39
IRF3-204ENST00000442265 CLIC5Q9NZA1 410 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms