RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ASB2Q96Q27 587 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 NT5C1AQ9BXI3 368 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 PCYOX1Q9UHG3 505 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRIP12Q14669 1992 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 PTPRFP10586 1907 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 AP1G2O75843 785 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 HLA-DRAP01903 254 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 SHBGP04278 402 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 CSH1P0DML2 217 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 CSH2P0DML3 217 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 ACO1P21399 889 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 MYL6P60660 151 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 SMAD4Q13485 552 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 MYBPC2Q14324 1141 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 TTC31Q49AM3 519 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 ERMARDQ5T6L9 678 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 C11orf63Q6NUN7 778 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 RHBDF2Q6PJF5 856 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 PIGWQ7Z7B1 504 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 SPATS2Q86XZ4 545 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 WDR49Q8IV35 697 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 EFHBQ8N7U6 833 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 C12orf50Q8NA57 414 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZSWIM2Q8NEG5 633 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 SPPL2BQ8TCT7 592 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 GPR152Q8TDT2 470 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 DDX1Q92499 740 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 CCT6BQ92526 530 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYFIP2Q96F07 1278 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 AP1M1Q9BXS5 423 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 CARD9Q9H257 536 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 EURLQ9NYK6 297 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 GCNT4Q9P109 453 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
CDC42BPA-208ENST00000442054 DAPK3O43293 454 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 THAP12O43422 761 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CFHP08603 1231 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM200BP0CF97 657 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 IL9P15248 144 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 BDNFP23560 247 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 IVDP26440 423 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PPP2R5DQ14738 602 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 SDHAF4Q5VUM1 108 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 FBXW10Q5XX13 1052 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 SDE2Q6IQ49 451 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 TMEM270Q6UE05 265 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 MRPL10Q7Z7H8 261 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ACOT1Q86TX2 421 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 TMEM86AQ8N2M4 240 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PRELID2Q8N945 189 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 RFFLQ8WZ73 363 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 SLCO2A1Q92959 643 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PCDHB18PQ96TA0 734 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PAAF1Q9BRP4 392 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PHF7Q9BWX1 381 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 C2orf71A6NGG8 1288 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 TTLL13PA6NNM8 815 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYBBP04839 570 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 GJA1P17302 382 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 HDCP19113 662 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 DLG4P78352 724 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ROR1Q01973 937 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 TMEM31Q5JXX7 168 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZBTB41Q5SVQ8 909 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CFAP58Q5T655 872 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 C9orf57Q5W0N0 161 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CDCA2Q69YH5 1023 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 COLGALT2Q8IYK4 626 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZNF461Q8TAF7 563 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 RAPGEF5Q92565 580 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CGRRF1Q99675 332 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 C1QTNF1Q9BXJ1 281 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ST6GALNAC4Q9H4F1 302 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PCDHB8Q9UN66 801 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 LINC01565O15544 149 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 IGHA2P01877 340 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ASGR2P07307 311 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CDC25CP30307 473 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 GBP1P32455 592 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 MFAP3P55082 362 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 LILRA4P59901 499 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 NOP14P78316 857 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ORC1Q13415 861 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ANO4Q32M45 955 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 RTP2Q5QGT7 225 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 UBXN11Q5T124 520 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 AADACL2Q6P093 401 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 ADGRD2Q7Z7M1 963 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 MAB21L3Q8N8X9 362 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 PGM2Q96G03 612 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 THAP2Q9H0W7 228 aa7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 UBE2TQ9NPD8 197 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 AFF4Q9UHB7 1163 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-208ENST00000442054 MAPK13O15264 365 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TGM5O43548 720 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 DCXO43602 365 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms