RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 NMUR1Q9HB89 426 aa25.3■■□□□ 1.64
CPNE1-217ENST00000439669 UBE2TQ9NPD8 197 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-217ENST00000439669 CYLDQ9NQC7 956 aa25.3■■□□□ 1.64
CPNE1-217ENST00000439669 OSER1Q9NX31 292 aa25.3■■□□□ 1.64
CPNE1-217ENST00000439669 XPO1O14980 1071 aaKnown RBP25.29■■□□□ 1.64
CPNE1-217ENST00000439669 SP9P0CG40 484 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 IRF1P10914 325 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 RARGP13631 454 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 BRD2P25440 801 aaKnown RBP25.29■■□□□ 1.64
CPNE1-217ENST00000439669 MRE11P49959 708 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 GRSF1Q12849 480 aaKnown RBP eCLIP25.29■■□□□ 1.643e-10■□□□□ 10.9
CPNE1-217ENST00000439669 HSP90AA4PQ58FG1 418 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 GBP6Q6ZN66 633 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 MAML2Q8IZL2 1156 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-217ENST00000439669 KIAA1958Q8N8K9 716 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 TFAP2BQ92481 460 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 CHFRQ96EP1 664 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 USP3Q9Y6I4 520 aa25.29■■□□□ 1.64
CPNE1-217ENST00000439669 RNF225M0QZC1 329 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-217ENST00000439669 TULP2O00295 520 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 TBX18O95935 607 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 MBD3O95983 291 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 KRT5P13647 590 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 ATP5C1P36542 298 aaKnown RBP25.28■■□□□ 1.64
CPNE1-217ENST00000439669 NBL1P41271 181 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 PSEN1P49768 467 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 CSTF1Q05048 431 aaKnown RBP25.28■■□□□ 1.64
CPNE1-217ENST00000439669 MAN2A1Q16706 1144 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 TRIM65Q6PJ69 517 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 Q6ZS52 159 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 EXOC4Q96A65 974 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 LRRC4Q9HBW1 653 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 NUDT5Q9UKK9 219 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 FBXO4Q9UKT5 387 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 CACNA1IQ9P0X4 2223 aa25.28■■□□□ 1.64
CPNE1-217ENST00000439669 E2F8A0AVK6 867 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 TRDMT1O14717 391 aaKnown RBP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 CALCAP01258 141 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 SETSIPP0DME0 302 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 RALAP11233 206 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 PRKCSHP14314 528 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 TKTL1P51854 596 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 CCINQ13939 588 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 EXOC3L4Q17RC7 722 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 TMEM196Q5HYL7 178 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 CT47A1Q5JQC4 288 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 RAB41Q5JT25 222 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 C10orf120Q5SQS8 335 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 NAIF1Q69YI7 327 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 LCLAT1Q6UWP7 414 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 RBM43Q6ZSC3 357 aaKnown RBP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 SCD5Q86SK9 330 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 TADA2BQ86TJ2 420 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 P2RY13Q9BPV8 354 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.27■■□□□ 1.64
CPNE1-217ENST00000439669 TBC1D14Q9P2M4 693 aa25.27■■□□□ 1.64
CPNE1-217ENST00000439669 M0QYV0 167 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 MDM4O15151 490 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 CYP17A1P05093 508 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 SLC9A1P19634 815 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 HOXD11P31277 338 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-217ENST00000439669 CCR3P51677 355 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 ZNF132P52740 706 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 MFAP3P55082 362 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 GOLGA8FQ08AF8 430 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 GOLGA8DPQ0D2H9 430 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 FSTL4Q6MZW2 842 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 GJB7Q6PEY0 223 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 ENOSF1Q7L5Y1 443 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 ARHGAP18Q8N392 663 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 ULBP1Q9BZM6 244 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 PRMT8Q9NR22 394 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-217ENST00000439669 DNMT3LQ9UJW3 386 aa25.26■■□□□ 1.63
CPNE1-217ENST00000439669 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.26■■□□□ 1.632e-6■■■■■ 55.4
CPNE1-217ENST00000439669 GTPBP10A4D1E9 387 aaKnown RBP25.25■■□□□ 1.63
CPNE1-217ENST00000439669 PLA2G4AP47712 749 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 GALK1P51570 392 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 ADIGQ0VDE8 80 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 GAS6Q14393 721 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 DHCR24Q15392 516 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 STILQ15468 1287 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 CNGA2Q16280 664 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 TSSK4Q6SA08 328 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 SASS6Q6UVJ0 657 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 SIX6OS1Q8N1H7 587 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 SYNPOQ8N3V7 929 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 CD101Q93033 1021 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 FAM81BQ96LP2 452 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 ZSWIM1Q9BR11 485 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 TUBGCP2Q9BSJ2 902 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 KLF16Q9BXK1 252 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-217ENST00000439669 CLIC5Q9NZA1 410 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 R4GN57 208 aa25.25■■□□□ 1.63
CPNE1-217ENST00000439669 KCNJ18B7U540 433 aa25.24■■□□□ 1.63
CPNE1-217ENST00000439669 PES1O00541 588 aaKnown RBP25.24■■□□□ 1.63
CPNE1-217ENST00000439669 ZBED1O96006 694 aa25.24■■□□□ 1.63
CPNE1-217ENST00000439669 ADH1CP00326 375 aa25.24■■□□□ 1.63
CPNE1-217ENST00000439669 EGFP01133 1207 aa25.24■■□□□ 1.63
CPNE1-217ENST00000439669 YWHAGP61981 247 aaKnown RBP eCLIP25.24■■□□□ 1.63
CPNE1-217ENST00000439669 APBA1Q02410 837 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms