RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GLUD2P49448 558 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 NAB2Q15742 525 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 ZPBP2Q6X784 338 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 PORCNQ9H237 461 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 ECT2Q9H8V3 914 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 CCL5P13501 91 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 BTKQ06187 659 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 C6orf10Q5SRN2 563 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 LENG1Q96BZ8 264 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 NLNQ9BYT8 704 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 ADA2Q9NZK5 511 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 AMACRQ9UHK6 382 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 MROH2AA6NES4 1674 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 NCF1BA6NI72 391 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 NCF1CA8MVU1 366 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 NCF1P14598 390 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 SPRP35270 261 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 EMC1Q8N766 993 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 PPTC7Q8NI37 304 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
NEK1-201ENST00000439128 OPLAHO14841 1288 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 LUC7L3O95232 432 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 AMD1P17707 334 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MYO1HQ8N1T3 1032 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MKL1Q969V6 931 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 CYTH2Q99418 400 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 JCHAINP01591 159 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 CDH8P55286 799 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 FAR2Q96K12 515 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 SOHLH2Q9NX45 425 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 TRIM10Q9UDY6 481 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 DTNAQ9Y4J8 743 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 ZMYM2Q9UBW7 1377 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 DUSP11O75319 330 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 FDFT1P37268 417 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 SETMARQ53H47 684 aaPredicted RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 SYDE1Q6ZW31 735 aaPredicted RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 DDX42Q86XP3 938 aaKnown RBP eCLIP12.51□□□□□ -0.41
NEK1-201ENST00000439128 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 IL25Q9H293 177 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 ZBTB39O15060 712 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PEX10O60683 326 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MICAL2O94851 1124 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PARNO95453 639 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 GABRR2P28476 465 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PDK2Q15119 407 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MARC1Q5VT66 337 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 PHF2O75151 1096 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 CYP11B1P15538 503 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 KRT20P35900 424 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 TRADDQ15628 312 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 MTSS1LQ765P7 747 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 CHCHD3Q9NX63 227 aaKnown RBP12.51□□□□□ -0.41
NEK1-201ENST00000439128 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
NEK1-201ENST00000439128 SOAT2O75908 522 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 NR1D1P20393 614 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PON1P27169 355 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PTPN7P35236 360 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 LBX1P52954 281 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 GRIK3Q13003 919 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 IFT88Q13099 833 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 DCLRE1AQ6PJP8 1040 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 SV2AQ7L0J3 742 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PATL1Q86TB9 770 aaKnown RBP12.5□□□□□ -0.41
NEK1-201ENST00000439128 PARD6BQ9BYG5 372 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 MOXD2PA6NHM9 499 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 PCNAP12004 261 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 HPGDP15428 266 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 OR1D2P34982 312 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 XRCC4Q13426 336 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 TMEM259Q4ZIN3 620 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 APOL2Q9BQE5 337 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
NEK1-201ENST00000439128 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms