RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PKDCCQ504Y2 493 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 CYTH2Q99418 400 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 KLF6Q99612 283 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 LPIN3Q9BQK8 851 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PLEKHA5Q9HAU0 1116 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 TCRBV9S1A1TA0A576 114 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 WDR91A4D1P6 747 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PAPSS1O43252 624 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 ZBED1O96006 694 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 ADRA1DP25100 572 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 KCNJ11Q14654 390 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 CA9Q16790 459 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SLC27A1Q6PCB7 646 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 RGS9BPQ6ZS82 235 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SESTD1Q86VW0 696 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 KIF2BQ8N4N8 673 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PQLC3Q8N755 202 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PCDH19Q8TAB3 1148 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SNX27Q96L92 541 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SNRNP25Q9BV90 132 aaKnown RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 USP29Q9HBJ7 922 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 PAK5Q9P286 719 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 A8MXQ7 604 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 BTBD19C9JJ37 291 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 DPYSL4O14531 572 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CHADO15335 359 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 NQO1P15559 274 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TGM2P21980 687 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 RBL1P28749 1068 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 KBTBD12Q3ZCT8 623 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 FAXCQ5TGI0 409 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 FAM228AQ86W67 206 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 BEST2Q8NFU1 509 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TCP10LQ8TDR4 215 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 OSMRQ99650 979 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 SSU72Q9NP77 194 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TEX264Q9Y6I9 313 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CCL15-CCL14A0A0B4J2E2 113 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 HCRTO43612 131 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 INHBAP08476 426 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TSHRP16473 764 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TFE3P19532 575 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 HDAC4P56524 1084 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 SNX16P57768 344 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 PTK7Q13308 1070 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CCL15Q16663 113 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 MZB1Q8WU39 189 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TEKT4Q8WW24 435 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ZNF75CPQ92670 426 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 TBCBQ99426 244 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 ADAMTS10Q9H324 1103 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 C12orf65Q9H3J6 166 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
HDAC8-214ENST00000439122 DERAQ9Y315 318 aa12.62□□□□□ -0.39
HDAC8-214ENST00000439122 IQANK1A0A1B0GTG1 560 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 GABBR2O75899 941 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 MT-ND3P03897 115 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 APRTP07741 180 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 FGFR1P11362 822 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 CCDC130P13994 396 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 AKAP5P24588 427 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 ADORA2BP29275 332 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 SOWAHAQ2M3V2 549 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
HDAC8-214ENST00000439122 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms