RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SORCS3Q9UPU3 1222 aa17.78■□□□□ 0.44
TARDBP-203ENST00000439080 CCL26Q9Y258 94 aa17.78■□□□□ 0.44
TARDBP-203ENST00000439080 E5RJQ4 531 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 TLR5O60602 858 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 HDCP19113 662 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 CDH5P33151 784 aaPredicted RBP17.77■□□□□ 0.43
TARDBP-203ENST00000439080 RPL34P49207 117 aaKnown RBP17.77■□□□□ 0.43
TARDBP-203ENST00000439080 PSEN1P49768 467 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 DAOAP59103 153 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 FMO1Q01740 532 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 ASIC2Q16515 512 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 E4F1Q66K89 784 aaPredicted RBP17.77■□□□□ 0.43
TARDBP-203ENST00000439080 SPECC1LQ69YQ0 1117 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 PM20D1Q6GTS8 502 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 VITQ6UXI7 678 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 SCD5Q86SK9 330 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 VSTM4Q8IW00 320 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 WDTC1Q8N5D0 677 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 TMEM35BQ8NCS4 154 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 CLEC4CQ8WTT0 213 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 NDRG1Q92597 394 aaKnown RBP17.77■□□□□ 0.43
TARDBP-203ENST00000439080 USP13Q92995 863 aaPredicted RBP17.77■□□□□ 0.43
TARDBP-203ENST00000439080 CPXM1Q96SM3 734 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 CYP2S1Q96SQ9 504 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 SLC4A5Q9BY07 1137 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 TRIM5Q9C035 493 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 MIS12Q9H081 205 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 SMOC2Q9H3U7 446 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 CYLDQ9NQC7 956 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 COL4A3Q01955 1670 aa17.77■□□□□ 0.43
TARDBP-203ENST00000439080 HEPACAM2A8MVW5 462 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 COCHO43405 550 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 FBXO21O94952 628 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 LSM8O95777 96 aaKnown RBP17.76■□□□□ 0.43
TARDBP-203ENST00000439080 CCDC172P0C7W6 258 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 CHRNB2P17787 502 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 ACADSBP45954 432 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 YWHAGP61981 247 aaKnown RBP eCLIP17.76■□□□□ 0.43
TARDBP-203ENST00000439080 TDGQ13569 410 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 ZNF268Q14587 947 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-203ENST00000439080 PTPN20Q4JDL3 420 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 SFMBT2Q5VUG0 894 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 SCML4Q8N228 414 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 ARHGAP18Q8N392 663 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 KHSRPQ92945 711 aaKnown RBP eCLIP17.76■□□□□ 0.431e-9■□□□□ 10.4
TARDBP-203ENST00000439080 PPP1R13BQ96KQ4 1090 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 PLA2G2FQ9BZM2 168 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 NACA2Q9H009 215 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 RNF38Q9H0F5 515 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 KIF9Q9HAQ2 790 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 TDP1Q9NUW8 608 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
TARDBP-203ENST00000439080 TJP2Q9UDY2 1190 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 ARHGAP26Q9UNA1 814 aa17.76■□□□□ 0.43
TARDBP-203ENST00000439080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■□□□□ 9.2
TARDBP-203ENST00000439080 FAM170AA1A519 330 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 YJEFN3A6XGL0 299 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 E7ENQ6 273 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 DPYSL4O14531 572 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 NARSO43776 548 aaKnown RBP17.75■□□□□ 0.43
TARDBP-203ENST00000439080 MBL2P11226 248 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-203ENST00000439080 RARGP13631 454 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 NOMO3P69849 1222 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 SLC7A9P82251 487 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 USP4Q13107 963 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 GRM2Q14416 872 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 IRF2BP2Q7Z5L9 587 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 TMEM110Q86TL2 294 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 SLC44A3Q8N4M1 653 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
TARDBP-203ENST00000439080 RIN3Q8TB24 985 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
TARDBP-203ENST00000439080 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 IRGQQ8WZA9 623 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 E2F7Q96AV8 911 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 SMPD4Q9NXE4 827 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 OBP2AQ9NY56 170 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 CLIC5Q9NZA1 410 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 CAPN11Q9UMQ6 739 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 DUSP12Q9UNI6 340 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 CPQQ9Y646 472 aa17.75■□□□□ 0.43
TARDBP-203ENST00000439080 TNFRSF10AO00220 468 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 PAPSS1O43252 624 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-203ENST00000439080 ERBB2P04626 1255 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 RALAP11233 206 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 ZBED6P86452 979 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 TRIM14Q14142 442 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 ZNF77Q15935 545 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 NAA35Q5VZE5 725 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 TRIM72Q6ZMU5 477 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 SCUBE3Q8IX30 993 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 TTC16Q8NEE8 873 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 ZNF397Q8NF99 534 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-203ENST00000439080 DEPDC1BQ8WUY9 529 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 AGPAT1Q99943 283 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 SYNCQ9H7C4 482 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 SEPT11Q9NVA2 429 aaKnown RBP17.74■□□□□ 0.43
TARDBP-203ENST00000439080 AIPL1Q9NZN9 384 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 NUDT5Q9UKK9 219 aa17.74■□□□□ 0.43
TARDBP-203ENST00000439080 MDM4O15151 490 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms