RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 OSCP1Q8WVF1 389 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 PPP2R3CQ969Q6 453 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 R3HDM4Q96D70 268 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 LENG8Q96PV6 779 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 TRIM5Q9C035 493 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 MS4A7Q9GZW8 240 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 DDX21Q9NR30 783 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 STK32BQ9NY57 414 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 TPCN1Q9ULQ1 816 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 PAXBP1Q9Y5B6 917 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 SCAPERQ9BY12 1400 aa4.03□□□□□ -1.76
HMGB3P12-201ENST00000438745 CFAP74Q9C0B2 1584 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CEP170BQ9Y4F5 1589 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CDK13Q14004 1512 aaKnown RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SUPT6HQ7KZ85 1726 aaKnown RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 TRIM43BA6NCK2 446 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRRT4C9JH25 899 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRKCBP05771 671 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DLDP09622 509 aaKnown RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 NPSP0C0P6 89 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 ENGP17813 658 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CTGFP29279 349 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 PDE1AP54750 535 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SUMO3P55854 103 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 GRM1Q13255 1194 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 NPY5RQ15761 445 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CYP1B1Q16678 543 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 PTCHD3Q3KNS1 767 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DEPDC1Q5TB30 811 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRAMEF17Q5VTA0 474 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DCAF12L1Q5VU92 463 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SLC9A4Q6AI14 798 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF66Q6ZN08 573 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 LRRC71Q8N4P6 559 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 OR56A3Q8NH54 315 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 BPIFB1Q8TDL5 484 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DDB2Q92466 427 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 TRIM43Q96BQ3 446 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CTHRC1Q96CG8 243 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 TBCBQ99426 244 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 TRMT13Q9NUP7 481 aaKnown RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SH3BP4Q9P0V3 963 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DNMT3BQ9UBC3 853 aaKnown RBP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CPNE7Q9UBL6 633 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 OGDHLQ9ULD0 1010 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 CORO2BQ9UQ03 480 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SNX14Q9Y5W7 946 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 SNX13Q9Y5W8 968 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 VWDEQ8N2E2 1590 aa4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF804BA4D1E1 1349 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MBD3L4A6NDZ8 208 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MBD3L3A6NE82 208 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 H7C1Q1 480 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 PEX14O75381 377 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MYCLP12524 364 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MYF5P13349 255 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZKSCAN1P17029 563 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 BCAT1P54687 386 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 FMO1Q01740 532 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 KRT17Q04695 432 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 PICALMQ13492 652 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CCNIQ14094 377 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CNGA2Q16280 664 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF425Q6IV72 752 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CAND1Q86VP6 1230 aaKnown RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CHSY1Q86X52 802 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 ABHD11Q8NFV4 315 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 XAGE5Q8WWM1 108 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 RAPGEF4Q8WZA2 1011 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 APIPQ96GX9 242 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 SNX18Q96RF0 628 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MACROD1Q9BQ69 325 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 C17orf80Q9BSJ5 609 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 NAA15Q9BXJ9 866 aaKnown RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 LRRC27Q9C0I9 530 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 GBA2Q9HCG7 927 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZSCAN32Q9NX65 697 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 COL20A1Q9P218 1284 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CDY1Q9Y6F8 540 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 LRP6O75581 1613 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 MYO3AQ8NEV4 1616 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 NPHP4O75161 1426 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 SYNMO15061 1565 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 CARMIL1Q5VZK9 1371 aa4.01□□□□□ -1.77
HMGB3P12-201ENST00000438745 TCRBV5S1A1TA0A578 114 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 RHPN2P1A8MT19 583 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 PYCARD-AS1I3L0S3 204 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 KPNA5O15131 536 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 CCP110O43303 1012 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 TUBB4AP04350 444 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 IFIT2P09913 472 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 CERS1P27544 350 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 GKP32189 559 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRELPP51888 382 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 POLD3Q15054 466 aaPredicted RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 LONRF1Q17RB8 773 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms