RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 IFRD2Q12894 506 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-208ENST00000438518 PTP4A2Q12974 167 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 CCDC85BQ15834 202 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-208ENST00000438518 MMS22LQ6ZRQ5 1243 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 SLC26A9Q7LBE3 791 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 GRASPQ7Z6J2 395 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-208ENST00000438518 TADA2BQ86TJ2 420 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 XYLT1Q86Y38 959 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 SCUBE3Q8IX30 993 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 C12orf76Q8N812 135 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-208ENST00000438518 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 MCRS1Q96EZ8 462 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 IL21Q9HBE4 155 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 WDR6Q9NNW5 1121 aaKnown RBP19.32■□□□□ 0.68
HDAC6-208ENST00000438518 ABCC13Q9NSE7 274 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 SCINQ9Y6U3 715 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 HSF2BPO75031 334 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 GABBR2O75899 941 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 F11P03951 625 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 H2AFZP0C0S5 128 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 USP17L7P0C7H9 530 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 PUS10Q3MIT2 529 aaKnown RBP19.31■□□□□ 0.68
HDAC6-208ENST00000438518 ARHGAP15Q53QZ3 475 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 PRSS36Q5K4E3 855 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 OR6B2Q6IFH4 312 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 OLFML1Q6UWY5 402 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 FAM183BPQ6ZVS7 135 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 H2AFVQ71UI9 128 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 MRPS31Q92665 395 aaKnown RBP19.31■□□□□ 0.68
HDAC6-208ENST00000438518 ZNF334Q9HCZ1 680 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-208ENST00000438518 MRPL47Q9HD33 250 aaKnown RBP19.31■□□□□ 0.68
HDAC6-208ENST00000438518 SPTLC3Q9NUV7 552 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 TMEM51Q9NW97 253 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 TAS2R14Q9NYV8 317 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 REV3LO60673 3130 aa19.31■□□□□ 0.68
HDAC6-208ENST00000438518 ANAPC1Q9H1A4 1944 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 TMCO5BA8MYB1 307 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 RALAP11233 206 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 MYL4P12829 197 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 YWHAGP61981 247 aaKnown RBP eCLIP19.3■□□□□ 0.68
HDAC6-208ENST00000438518 SMAD4Q13485 552 aaKnown RBP19.3■□□□□ 0.68
HDAC6-208ENST00000438518 RAD9BQ6WBX8 426 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 MAFAQ8NHW3 353 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-208ENST00000438518 CTNNBL1Q8WYA6 563 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-208ENST00000438518 POPDC2Q9HBU9 364 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 OLA1Q9NTK5 396 aaKnown RBP19.3■□□□□ 0.68
HDAC6-208ENST00000438518 PARVAQ9NVD7 372 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 HCFC1R1Q9NWW0 138 aa19.3■□□□□ 0.68
HDAC6-208ENST00000438518 NOTCH4Q99466 2003 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 ZNF840PA6NDX5 716 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 PIK3R2O00459 728 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 LTFP02788 710 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 TMEM253P0C7T8 217 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 KCNA5P22460 613 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 YWHAZP63104 245 aaKnown RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 GPC5P78333 572 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 CCZ1BP86790 482 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 CCZ1P86791 482 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 FAM102AQ5T9C2 384 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 DNAJC24Q6P3W2 148 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 KLHDC10Q6PID8 442 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 BHLHA9Q7RTU4 235 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 HS6ST3Q8IZP7 471 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 SUSD6Q92537 303 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 ZNF653Q96CK0 615 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 SELENOOQ9BVL4 669 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 ATXN3LQ9H3M9 355 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 RRN3Q9NYV6 651 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 GMIPQ9P107 970 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 CNOT8Q9UFF9 292 aaKnown RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 LCMT1Q9UIC8 334 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 FAM50BQ9Y247 325 aa19.29■□□□□ 0.68
HDAC6-208ENST00000438518 MRPS23Q9Y3D9 190 aaKnown RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 ZFP37Q9Y6Q3 630 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-208ENST00000438518 A0A1W2PRU2 124 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 YJEFN3A6XGL0 299 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 E7ENQ6 273 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 TADA3O75528 432 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 RRM1P23921 792 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 FSHRP23945 695 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 MAGEA1P43355 309 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 GALCP54803 685 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 BSPRYQ5W0U4 402 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 BTBD8Q5XKL5 378 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 PLEKHA7Q6IQ23 1121 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 GAREM2Q75VX8 874 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 TMEM150AQ86TG1 271 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 PPM1EQ8WY54 764 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 FAM149B1Q96BN6 582 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 CALR3Q96L12 384 aaKnown RBP19.28■□□□□ 0.68
HDAC6-208ENST00000438518 TJP2Q9UDY2 1190 aa19.28■□□□□ 0.68
HDAC6-208ENST00000438518 NUP210Q8TEM1 1887 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-208ENST00000438518 A0A1W2PQH9 124 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 TCRBV5S1A1TA0A578 114 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 SIGLEC16A6NMB1 481 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 CAPN9O14815 690 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 ZNF263O14978 683 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 DAB1O75553 588 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 KRT3P12035 628 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms