RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KIAA0319Q5VV43 1072 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 CD300LGQ6UXG3 332 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 SLC35B2Q8TB61 432 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.05■□□□□ 0.16
SGCE-205ENST00000437425 SH3GL2Q99962 352 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 PAAF1Q9BRP4 392 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 CALN1Q9BXU9 219 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 OXCT2Q9BYC2 517 aaPredicted RBP16.05■□□□□ 0.16
SGCE-205ENST00000437425 DMAP1Q9NPF5 467 aaPredicted RBP16.05■□□□□ 0.16
SGCE-205ENST00000437425 RCOR3Q9P2K3 495 aaPredicted RBP16.05■□□□□ 0.16
SGCE-205ENST00000437425 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 NEU2Q9Y3R4 380 aa16.05■□□□□ 0.16
SGCE-205ENST00000437425 SMAPO00193 183 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 CLDN5O00501 218 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 NBNO60934 754 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TGM2P21980 687 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 GGCXP38435 758 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 ADCY8P40145 1251 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TKTL1P51854 596 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 HDAC4P56524 1084 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 DHX9Q08211 1270 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 ADCY1Q08828 1119 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TAF5Q15542 800 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 OASLQ15646 514 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 CDO1Q16878 200 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 ZDHHC24Q6UX98 284 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 BEND5Q7L4P6 421 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 DCP1BQ8IZD4 617 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 ALLCQ8N6M5 410 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TSEN2Q8NCE0 465 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 DBF4BQ8NFT6 615 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 FBXO25Q8TCJ0 367 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 FAM149B1Q96BN6 582 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 SLC2A13Q96QE2 648 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 SLC9A7Q96T83 725 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TIMM13Q9Y5L4 95 aaPredicted RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 GOLGA6L10A6NI86 522 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 MCF2LO15068 1137 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 OAZ2O95190 189 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 KRT14P02533 472 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 CXCL10P02778 98 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 STIP1P31948 543 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 HSD17B3P37058 310 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 BRCC3P46736 316 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 ZNF135P52742 658 aaPredicted RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 DPYSL3Q14195 570 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 DPYSL2Q16555 572 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 CYP4V2Q6ZWL3 525 aaPredicted RBP16.04■□□□□ 0.16
SGCE-205ENST00000437425 ANKS1BQ7Z6G8 1248 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 MYLPFQ96A32 169 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 PEBP4Q96S96 227 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 PKMYT1Q99640 499 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 SMOQ99835 787 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 RTP3Q9BQQ7 232 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 COLEC11Q9BWP8 271 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 TXLNGYQ9BZA5 131 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 PCDH9Q9HC56 1237 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 CACNG4Q9UBN1 327 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 DNPEPQ9ULA0 475 aa16.04■□□□□ 0.16
SGCE-205ENST00000437425 AGPSO00116 658 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 TADA2AO75478 443 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 SYF2O95926 243 aaKnown RBP16.03■□□□□ 0.16
SGCE-205ENST00000437425 F9P00740 461 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 RARGP13631 454 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 IBSPP21815 317 aaPredicted RBP16.03■□□□□ 0.16
SGCE-205ENST00000437425 KLRC2P26717 231 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 DAOAP59103 153 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 TRMT10CQ7L0Y3 403 aaKnown RBP16.03■□□□□ 0.16
SGCE-205ENST00000437425 DEFB106AQ8N104 65 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 ACTL9Q8TC94 416 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 P3H4Q92791 437 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 HAUS1Q96CS2 278 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 FAF2Q96CS3 445 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 PGAP3Q96FM1 320 aaPredicted RBP16.03■□□□□ 0.16
SGCE-205ENST00000437425 FUBP3Q96I24 572 aaKnown RBP eCLIP16.03■□□□□ 0.16
SGCE-205ENST00000437425 ZIM3Q96PE6 472 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 NPY6RQ99463 290 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 PABPC3Q9H361 631 aaKnown RBP16.03■□□□□ 0.16
SGCE-205ENST00000437425 ANAPC5Q9UJX4 755 aa16.03■□□□□ 0.16
SGCE-205ENST00000437425 TSC2P49815 1807 aa16.02■□□□□ 0.16
SGCE-205ENST00000437425 CFAP69A5D8W1 941 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 H3BQF6 201 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 CAPN9O14815 690 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 PQBP1O60828 265 aaKnown RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 BEST1O76090 585 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 DDHD2O94830 711 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms