RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PTK2Q05397 1052 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 FCHO2Q0JRZ9 810 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 MTF1Q14872 753 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 WDR72Q3MJ13 1102 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 TXNDC11Q6PKC3 985 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ZNF662Q6ZS27 426 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ERMP1Q7Z2K6 904 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 TTC8Q8TAM2 541 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 SEPT5Q99719 369 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ARID3AQ99856 593 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ATXN3LQ9H3M9 355 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 IL21Q9HBE4 155 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 GDAP2Q9NXN4 497 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ADGRG1Q9Y653 693 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 GREB1Q4ZG55 1949 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 ANAPC1Q9H1A4 1944 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 F5P12259 2224 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 CHADO15335 359 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 PNMA6AP0CW24 399 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 HOXC13P31276 330 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 TAF6P49848 677 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ZNF132P52740 706 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 KRT83P78385 493 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ARID5AQ03989 594 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 SLC18A3Q16572 532 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 MGAT5BQ3V5L5 792 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 C10orf76Q5T2E6 689 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 GPR158Q5T848 1215 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 WSCD1Q658N2 575 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 TOGARAM2Q6ZUX3 1019 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ZNF571Q7Z3V5 609 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 LIMS2Q7Z4I7 341 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 VPS36Q86VN1 386 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 STKLD1Q8NE28 680 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 GIPC2Q8TF65 315 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ATRIPQ8WXE1 791 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 EPC1Q9H2F5 836 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 DEF6Q9H4E7 631 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 CISHQ9NSE2 258 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 TMLHEQ9NVH6 421 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 HSFX1Q9UBD0 423 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 NOCTQ9UK39 431 aaKnown RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 NENFQ9UMX5 172 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 ASB3Q9Y575 518 aa11.57□□□□□ -0.56
HMGCL-204ENST00000436439 EP300Q09472 2414 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-204ENST00000436439 MYO16Q9Y6X6 1858 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 CYP26A1O43174 497 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 AKR1B10O60218 316 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 IPO7O95373 1038 aaKnown RBP11.56□□□□□ -0.56
HMGCL-204ENST00000436439 CYP11B1P15538 503 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 TNNC1P63316 161 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 SATB1Q01826 763 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 INCA1Q0VD86 236 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 SV2CQ496J9 727 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 DPH6Q7L8W6 267 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 YAF2Q8IY57 180 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 SLC30A5Q8TAD4 765 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 OLIG1Q8TAK6 271 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 DDX1Q92499 740 aaKnown RBP11.56□□□□□ -0.56
HMGCL-204ENST00000436439 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 ELMO3Q96BJ8 720 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 SMG9Q9H0W8 520 aaKnown RBP11.56□□□□□ -0.56
HMGCL-204ENST00000436439 L2HGDHQ9H9P8 463 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 GTSE1Q9NYZ3 720 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 NCDNQ9UBB6 729 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 ADAMTS1Q9UHI8 967 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 DSEQ9UL01 958 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 EML5Q05BV3 1969 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 PTPRDP23468 1912 aa11.56□□□□□ -0.56
HMGCL-204ENST00000436439 RALGAPA1Q6GYQ0 2036 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 A0A087X0T9 212 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 KPNA7A9QM74 516 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TACC1O75410 805 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 PAEPP09466 180 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 FAM228BP0C875 321 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 HAPLN1P10915 354 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 KRT5P13647 590 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TUFMP49411 452 aaKnown RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 GPR15P49685 360 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 PDE6CP51160 858 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 KPNA1P52294 538 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 MLLT6P55198 1093 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 CDR2Q01850 454 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TNK2Q07912 1038 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 DMWDQ09019 674 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SPA17Q15506 151 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TMEM270Q6UE05 265 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms