RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 TCP11X2Q5H9J9 407 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 RAB41Q5JT25 222 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 TRIM68Q6AZZ1 485 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
SMPD4-207ENST00000435455 CFAP97Q9P2B7 532 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 APEX2Q9UBZ4 518 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 PIEZO1Q92508 2521 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 PES1O00541 588 aaKnown RBP17.11■□□□□ 0.33
SMPD4-207ENST00000435455 NFATC1O95644 943 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 KRT5P13647 590 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 PON1P27169 355 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
SMPD4-207ENST00000435455 NHLH1Q02575 133 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 LRRC32Q14392 662 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 EML3Q32P44 896 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 KLHDC10Q6PID8 442 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 TFAP2BQ92481 460 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 CDK5RAP1Q96SZ6 601 aaKnown RBP17.11■□□□□ 0.33
SMPD4-207ENST00000435455 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ECT2Q9H8V3 914 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPD4-207ENST00000435455 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
SMPD4-207ENST00000435455 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPD4-207ENST00000435455 ZBED1O96006 694 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 TPM2P07951 284 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 RALAP11233 206 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 RARGP13631 454 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
SMPD4-207ENST00000435455 PLA2G4AP47712 749 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 PGFP49763 221 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 FZD5Q13467 585 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 PKDCCQ504Y2 493 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 CDKAL1Q5VV42 579 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 TXNDC11Q6PKC3 985 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 C1orf210Q8IVY1 113 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 UBA3Q8TBC4 463 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 OTUB2Q96DC9 234 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
SMPD4-207ENST00000435455 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 NMUR1Q9HB89 426 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 LRRC4Q9HBW1 653 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
SMPD4-207ENST00000435455 OTOL1A6NHN0 477 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-207ENST00000435455 H0Y858 1186 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 M0QYV0 167 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 TULP2O00295 520 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 MED7O43513 233 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 TKTL1P51854 596 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 MYL5Q02045 173 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 PON2Q15165 354 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 MEA1Q16626 185 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 ARHGAP44Q17R89 818 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 C10orf120Q5SQS8 335 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 PM20D1Q6GTS8 502 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-207ENST00000435455 SCD5Q86SK9 330 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 SHC3Q92529 594 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 ATOH1Q92858 354 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-207ENST00000435455 LINC00597Q9H2U6 94 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 CHRDQ9H2X0 955 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-207ENST00000435455 OSER1Q9NX31 292 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 DNMT3LQ9UJW3 386 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
SMPD4-207ENST00000435455 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
SMPD4-207ENST00000435455 LAMTOR5O43504 91 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 TBX18O95935 607 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 CHRNB1P11230 501 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 PTMSP20962 102 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 GJA4P35212 333 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 USP8P40818 1118 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 TYRO3Q06418 890 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 SCML4Q8N228 414 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 SYNPOQ8N3V7 929 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 ZSWIM1Q9BR11 485 aa17.08■□□□□ 0.32
SMPD4-207ENST00000435455 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms